RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 CALB2P22676 271 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 DCTP40126 519 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 MASP1P48740 699 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 MEOX1P50221 254 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 CASP9P55211 416 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 CDK6Q00534 326 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 ALDH6A1Q02252 535 aaKnown RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 PLGLB1Q02325 96 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 C19orf57Q0VDD7 668 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 FOXO1Q12778 655 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 SLC10A1Q14973 349 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 INPP5JQ15735 1006 aaPredicted RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 ZNF141Q15928 474 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 CYP51A1Q16850 503 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 SPATS1Q496A3 300 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 GTDC1Q4AE62 458 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 INTS11Q5TA45 600 aaKnown RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 REEP3Q6NUK4 255 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 ERICH5Q6P6B1 374 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 KRT73Q86Y46 540 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 PLCZ1Q86YW0 608 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 CMIPQ8IY22 773 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 ZNF619Q8N2I2 560 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 POU5F2Q8N7G0 328 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 C11orf65Q8NCR3 313 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 BHLHE22Q8NFJ8 381 aaPredicted RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 TNIP2Q8NFZ5 429 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 BBS10Q8TAM1 723 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 GRHL3Q8TE85 626 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 SLC38A5Q8WUX1 472 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 FAR1Q8WVX9 515 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 RCN3Q96D15 328 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 OTUB1Q96FW1 271 aaPredicted RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 AURKBQ96GD4 344 aaPredicted RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 GPATCH1Q9BRR8 931 aaKnown RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 PTGES2Q9H7Z7 377 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 PROK2Q9HC23 129 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 BCL2L10Q9HD36 194 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 SLC35A3Q9Y2D2 325 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 IFT52Q9Y366 437 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 MRPS18CQ9Y3D5 142 aaKnown RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 L3MBTL1Q9Y468 752 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 DTNAQ9Y4J8 743 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 WIF1Q9Y5W5 379 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 KCNE3Q9Y6H6 103 aa8.3□□□□□ -1.08
CIRBP-218ENST00000588344 KMT2BQ9UMN6 2715 aaPredicted RBP8.3□□□□□ -1.08
CIRBP-218ENST00000588344 IGLV3-32A0A0A0MS00 114 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 PRORSD1PA6NEY8 169 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 AGAP5A6NIR3 686 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 NPIPB9F8W1W9 429 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 GTPBP1O00178 669 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 SNPHO15079 494 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 KIAA0513O60268 411 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 EIF4E2O60573 245 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 FCMRO60667 390 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 ATP5HO75947 161 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 PDE9AO76083 593 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 PGM3O95394 542 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 H6PDO95479 791 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 ANGPTL1O95841 491 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 IFNA14P01570 189 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 DBIP07108 87 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 ZNF24P17028 368 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 GCKP35557 465 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 ST13P50502 369 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 NUDT2P50583 147 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 GAS1P54826 345 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 SUMO3P55854 103 aaPredicted RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 GPR85P60893 370 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 PPIAP62937 165 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 CHRNEQ04844 493 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 VEZF1Q14119 521 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 CAPRIN1Q14444 709 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 GANABQ14697 944 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 LARS2Q15031 903 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 GPR68Q15743 365 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 SYPL1Q16563 259 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 GRAMD1BQ3KR37 738 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 CCNJQ5T5M9 372 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 PRAMEF20Q5VT98 475 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 TYW3Q6IPR3 259 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 C16orf89Q6UX73 402 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 EIF3MQ7L2H7 374 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 NET1Q7Z628 596 aaPredicted RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 ZNF843Q8N446 348 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 FAM109AQ8N4B1 249 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 CISD2Q8N5K1 135 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 HIPK4Q8NE63 616 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 CPT1CQ8TCG5 803 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 DUSP19Q8WTR2 217 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 NR4A3Q92570 626 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 SNRNP40Q96DI7 357 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 REXO5Q96IC2 774 aaKnown RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 JSRP1Q96MG2 331 aaPredicted RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 BBC3Q96PG8 261 aaPredicted RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 ZNF607Q96SK3 696 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 TREX2Q9BQ50 279 aaPredicted RBP8.29□□□□□ -1.08
CIRBP-218ENST00000588344 HES7Q9BYE0 225 aa8.29□□□□□ -1.08
CIRBP-218ENST00000588344 TTTY12Q9BZ98 90 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms