RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 B4GALT2O60909 372 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 SOX14O95416 240 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 CHRM5P08912 532 aaPredicted RBP13.65□□□□□ -0.22
CCDC43-203ENST00000588210 HSD17B2P37059 387 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 SMIM11AP58511 58 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 ZNF91Q05481 1191 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 TP53BP2Q13625 1128 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 KIR2DS3Q14952 304 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 ARHGAP19Q14CB8 494 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 SPHARQ15513 63 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 OCLNQ16625 522 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 CASP12Q6UXS9 341 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 CLIP4Q8N3C7 705 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 GALNT6Q8NCL4 622 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 OR8J1Q8NGP2 316 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 SETD6Q8TBK2 473 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 SLC22A18Q96BI1 424 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 NXPE2Q96DL1 559 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 QRFPRQ96P65 431 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 AIF1LQ9BQI0 150 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 HOXD1Q9GZZ0 328 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 SEMA3GQ9NS98 782 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 NDUFB11Q9NX14 153 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 ACTR10Q9NZ32 417 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 NPAP1Q9NZP6 1156 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 LOXL2Q9Y4K0 774 aa13.65□□□□□ -0.22
CCDC43-203ENST00000588210 RTCAO00442 366 aaKnown RBP13.64□□□□□ -0.23
CCDC43-203ENST00000588210 CTDSP2O14595 271 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 GSTT2P0CG29 244 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 GSTT2BP0CG30 244 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 CXCR2P25025 360 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 REEP5Q00765 189 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 ALDH6A1Q02252 535 aaKnown RBP13.64□□□□□ -0.23
CCDC43-203ENST00000588210 FOXD4Q12950 439 aaPredicted RBP13.64□□□□□ -0.23
CCDC43-203ENST00000588210 SPDYE7PQ495Y7 208 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 DEF8Q6ZN54 512 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 KMT5CQ86Y97 462 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 SLC34A3Q8N130 599 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 NANOGP1Q8N7R0 232 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 ANKRD53Q8N9V6 530 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 LINC01555Q8NAE3 123 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 OR4D11Q8NGI4 311 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 RAB8BQ92930 207 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 TMCO6Q96DC7 493 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 ZNF607Q96SK3 696 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 MAP3K3Q99759 626 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 KCNS3Q9BQ31 491 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 POLR2J3Q9H1A7 115 aaKnown RBP13.64□□□□□ -0.23
CCDC43-203ENST00000588210 TAC3Q9UHF0 121 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 POU2F3Q9UKI9 436 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 STUB1Q9UNE7 303 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 WDFY3Q8IZQ1 3526 aa13.64□□□□□ -0.23
CCDC43-203ENST00000588210 A0A1W2PNU3 283 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 ZNF670-ZNF695F2Z2N8 137 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 H3BN98 237 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 TP53P04637 393 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 IGFBP1P08833 259 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 JMJD7P0C870 316 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 MAGP20916 626 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 TNFSF8P32971 234 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 FEN1P39748 380 aaKnown RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 SOX3P41225 446 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 GABREP78334 506 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 HSPB3Q12988 150 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 MLLT11Q13015 90 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 MLC1Q15049 377 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 IGF2-ASQ6U949 168 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 NUDT13Q86X67 352 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 PROKR2Q8NFJ6 384 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 IL17RDQ8NFM7 739 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 VANGL1Q8TAA9 524 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 ZBED6CLQ96FA7 236 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 WDFY2Q96P53 400 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 F2RL3Q96RI0 385 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 CNPPD1Q9BV87 410 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 ACAT2Q9BWD1 397 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 BARHL1Q9BZE3 327 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 SERHL2Q9H4I8 314 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 NT5DC2Q9H857 520 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 MOV10Q9HCE1 1003 aaKnown RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 ACSS1Q9NUB1 689 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 CLEC2DQ9UHP7 191 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 NCOR2Q9Y618 2525 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 HYKKA2RU49 373 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 ISM1B1AKI9 464 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 TPST2O60704 377 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 UGT2B17O75795 530 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 PSMA1P25786 263 aaKnown RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 RPS19P39019 145 aaKnown RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 MLLT3P42568 568 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 CRYBB2P43320 205 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 PCYT1AP49585 367 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 CARTPTQ16568 116 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 AGAP6Q5VW22 663 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 CD300LDQ6UXZ3 194 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 RBM45Q8IUH3 476 aaKnown RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 C2orf73Q8N5S3 287 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-203ENST00000588210 AGAP4Q96P64 663 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 OR2A14Q96R47 310 aa13.63□□□□□ -0.23
CCDC43-203ENST00000588210 TSSK6Q9BXA6 273 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms