RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 POLR3FQ9H1D9 316 aaPredicted RBP4.47□□□□□ -1.69
TUBD1-208ENST00000588009 GALPQ9UBC7 116 aa4.47□□□□□ -1.69
TUBD1-208ENST00000588009 GNG12Q9UBI6 72 aa4.47□□□□□ -1.69
TUBD1-208ENST00000588009 MLXQ9UH92 298 aa4.47□□□□□ -1.69
TUBD1-208ENST00000588009 NAALAD2Q9Y3Q0 740 aa4.47□□□□□ -1.69
TUBD1-208ENST00000588009 GMPPBQ9Y5P6 360 aa4.47□□□□□ -1.69
TUBD1-208ENST00000588009 METP08581 1390 aa4.47□□□□□ -1.69
TUBD1-208ENST00000588009 ABCC8Q09428 1581 aa4.47□□□□□ -1.69
TUBD1-208ENST00000588009 TTC37Q6PGP7 1564 aa4.47□□□□□ -1.69
TUBD1-208ENST00000588009 DNMBPQ6XZF7 1577 aa4.47□□□□□ -1.69
TUBD1-208ENST00000588009 RGS12O14924 1447 aa4.46□□□□□ -1.69
TUBD1-208ENST00000588009 SOGA1O94964 1423 aa4.46□□□□□ -1.69
TUBD1-208ENST00000588009 NUP160Q12769 1436 aa4.46□□□□□ -1.69
TUBD1-208ENST00000588009 CACNA1AO00555 2505 aa4.46□□□□□ -1.69
TUBD1-208ENST00000588009 GRIN2AQ12879 1464 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 ZNF208O43345 1280 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 B4GALT2O60909 372 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 JCHAINP01591 159 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 HCKP08631 526 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 IGFBP1P08833 259 aaPredicted RBP4.46□□□□□ -1.7
TUBD1-208ENST00000588009 TPSB2P20231 275 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 SPRP35270 261 aaPredicted RBP4.46□□□□□ -1.7
TUBD1-208ENST00000588009 EWSR1Q01844 656 aaKnown RBP eCLIP4.46□□□□□ -1.7
TUBD1-208ENST00000588009 CSTF1Q05048 431 aaKnown RBP4.46□□□□□ -1.7
TUBD1-208ENST00000588009 ZNF33BQ06732 778 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 LY6DQ14210 128 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 TPSAB1Q15661 275 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 ZIC1Q15915 447 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 KRTAP24-1Q3LI83 254 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 TMEM225Q6GV28 225 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 SCYL2Q6P3W7 929 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 ZYG11AQ6WRX3 759 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 PRSS48Q7RTY5 328 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 RNF130Q86XS8 419 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 VSTM4Q8IW00 320 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 UBQLNLQ8IYU4 475 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 SLC38A6Q8IZM9 456 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 Q8NBF4 154 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 SUMF1Q8NBK3 374 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 RIT2Q99578 217 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 BARHL1Q9BZE3 327 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 CRNKL1Q9BZJ0 848 aaKnown RBP4.46□□□□□ -1.7
TUBD1-208ENST00000588009 TRIM9Q9C026 710 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 VPS33BQ9H267 617 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 TM9SF3Q9HD45 589 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 FANCFQ9NPI8 374 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 MRPL39Q9NYK5 338 aaKnown RBP4.46□□□□□ -1.7
TUBD1-208ENST00000588009 ASIC3Q9UHC3 531 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 CYTH4Q9UIA0 394 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 LCMT1Q9UIC8 334 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 ANAPC7Q9UJX3 599 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 POGZQ7Z3K3 1410 aa4.46□□□□□ -1.7
TUBD1-208ENST00000588009 XKRY2A2RUG3 117 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 BTN3A3O00478 584 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 PRRG1O14668 218 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 EFNA2O43921 213 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 RAMP1O60894 148 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 WNT2P09544 360 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 BCKDHAP12694 445 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 ZNF10P21506 573 aaPredicted RBP4.45□□□□□ -1.7
TUBD1-208ENST00000588009 TBXA2RP21731 343 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 UGT1A4P22310 534 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 BDKRB1P46663 353 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 ATP4BP51164 291 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 MFAP2P55001 183 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 MAP2K1Q02750 393 aaPredicted RBP4.45□□□□□ -1.7
TUBD1-208ENST00000588009 PCK2Q16822 640 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 TMEM52BQ4KMG9 183 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 C10orf120Q5SQS8 335 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 C16orf62Q7Z3J2 963 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 CEACAM19Q7Z692 300 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 CDH26Q8IXH8 852 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 ZNF248Q8NDW4 579 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 PRSS33Q8NF86 280 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 BEST4Q8NFU0 473 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 OR8J1Q8NGP2 316 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 FNDC8Q8TC99 324 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 TBCKQ8TEA7 893 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 LRRC15Q8TF66 581 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 PIGCQ92535 297 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 SH3YL1Q96HL8 342 aaPredicted RBP4.45□□□□□ -1.7
TUBD1-208ENST00000588009 AMDHD1Q96NU7 426 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 TMEM43Q9BTV4 400 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 CCDC28BQ9BUN5 200 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 MAGT1Q9H0U3 335 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 FN3KRPQ9HA64 309 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 ABCC13Q9NSE7 274 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 HYPKQ9NX55 129 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 NUDT4Q9NZJ9 180 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 PIPOXQ9P0Z9 390 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 CTNNA3Q9UI47 895 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 CRLS1Q9UJA2 301 aa4.45□□□□□ -1.7
TUBD1-208ENST00000588009 CAMSAP1Q5T5Y3 1602 aa4.44□□□□□ -1.7
TUBD1-208ENST00000588009 TRAV26-1A0A087WT03 109 aa4.44□□□□□ -1.7
TUBD1-208ENST00000588009 SOCS3O14543 225 aa4.44□□□□□ -1.7
TUBD1-208ENST00000588009 EDIL3O43854 480 aa4.44□□□□□ -1.7
TUBD1-208ENST00000588009 TPST2O60704 377 aa4.44□□□□□ -1.7
TUBD1-208ENST00000588009 TSC22D2O75157 780 aa4.44□□□□□ -1.7
TUBD1-208ENST00000588009 RPL4P36578 427 aaKnown RBP4.44□□□□□ -1.7
TUBD1-208ENST00000588009 CEBPDP49716 269 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms