RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 DTNBP1Q96EV8 351 aa17.53■□□□□ 0.4
DDX39A-204ENST00000586558 TTTY12Q9BZ98 90 aa17.53■□□□□ 0.4
DDX39A-204ENST00000586558 SAP130Q9H0E3 1048 aa17.53■□□□□ 0.4
DDX39A-204ENST00000586558 EFCAB1Q9HAE3 211 aa17.53■□□□□ 0.4
DDX39A-204ENST00000586558 GALNT9Q9HCQ5 603 aa17.53■□□□□ 0.4
DDX39A-204ENST00000586558 A4GALTQ9NPC4 353 aa17.53■□□□□ 0.4
DDX39A-204ENST00000586558 OLAHQ9NV23 265 aa17.53■□□□□ 0.4
DDX39A-204ENST00000586558 ASF1BQ9NVP2 202 aa17.53■□□□□ 0.4
DDX39A-204ENST00000586558 CALML5Q9NZT1 146 aa17.53■□□□□ 0.4
DDX39A-204ENST00000586558 B4GALT7Q9UBV7 327 aa17.53■□□□□ 0.4
DDX39A-204ENST00000586558 WDR45Q9Y484 360 aa17.53■□□□□ 0.4
DDX39A-204ENST00000586558 A0A1W2PQD3 144 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 LRRC3CA6NJW4 275 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 NPIPB9F8W1W9 429 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 FXYD1O00168 92 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 SCDO00767 359 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 KIAA0513O60268 411 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 TNFRSF21O75509 655 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 DCTP40126 519 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 ATP12AP54707 1039 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 GAS1P54826 345 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 MLLT10P55197 1068 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 ALDH6A1Q02252 535 aaKnown RBP17.52■□□□□ 0.4
DDX39A-204ENST00000586558 GPAT3Q53EU6 434 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 ZNF324BQ6AW86 544 aaPredicted RBP17.52■□□□□ 0.4
DDX39A-204ENST00000586558 TIGD3Q6B0B8 471 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 LRRC74BQ6ZQY2 392 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 MISPQ8IVT2 679 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 METTL25Q8N6Q8 603 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 OR8J3Q8NGG0 315 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 SLX1AQ9BQ83 275 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 THUMPD3Q9BV44 507 aaKnown RBP17.52■□□□□ 0.4
DDX39A-204ENST00000586558 IKZF5Q9H5V7 419 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 QPCTLQ9NXS2 382 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 FLRT3Q9NZU0 649 aa17.52■□□□□ 0.4
DDX39A-204ENST00000586558 ZNF462Q96JM2 2506 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 C15orf38-AP3S2A0A0A6YYH1 394 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 PRAMEF27A3QJZ7 478 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 TFECO14948 347 aaPredicted RBP17.51■□□□□ 0.39
DDX39A-204ENST00000586558 SNPHO15079 494 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 SCO2O43819 266 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 FCMRO60667 390 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 H6PDO95479 791 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 TFPTP0C1Z6 253 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 ENDOUP21128 410 aaKnown RBP17.51■□□□□ 0.39
DDX39A-204ENST00000586558 CRISP3P54108 245 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 PPIAP62937 165 aaKnown RBP17.51■□□□□ 0.39
DDX39A-204ENST00000586558 CAPRIN1Q14444 709 aaKnown RBP17.51■□□□□ 0.39
DDX39A-204ENST00000586558 SYPL1Q16563 259 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 RNFT1Q5M7Z0 435 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 GCNT6Q5T4J0 391 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 FNDC7Q5VTL7 733 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 PRAMEF8Q5VWM4 474 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 PRAMEF7Q5VXH5 474 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 NANOGP8Q6NSW7 305 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 HACD2Q6Y1H2 254 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 FRRS1Q6ZNA5 592 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 ARPINQ7Z6K5 226 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 SIAH3Q8IW03 269 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 ANKFN1Q8N957 763 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 OR1J4Q8NGS1 313 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 JSRP1Q96MG2 331 aaPredicted RBP17.51■□□□□ 0.39
DDX39A-204ENST00000586558 SLC38A1Q9H2H9 487 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 TMEM38AQ9H6F2 299 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 ZNF703Q9H7S9 590 aaPredicted RBP17.51■□□□□ 0.39
DDX39A-204ENST00000586558 NANOGQ9H9S0 305 aa17.51■□□□□ 0.39
DDX39A-204ENST00000586558 PRRC2CQ9Y520 2896 aaKnown RBP17.5■□□□□ 0.39
DDX39A-204ENST00000586558 H3BNH8 94 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 ADAM10O14672 748 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 AIM2O14862 343 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 SLC28A2O43868 658 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 RFC3P40938 356 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 MTPNP58546 118 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 TLE1Q04724 770 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 ZNF141Q15928 474 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 KLHL26Q53HC5 615 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 TYW3Q6IPR3 259 aaKnown RBP17.5■□□□□ 0.39
DDX39A-204ENST00000586558 MARCH3Q86UD3 253 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 PLCZ1Q86YW0 608 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 ZNF619Q8N2I2 560 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 FAM109AQ8N4B1 249 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 SLC38A5Q8WUX1 472 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 SLC39A3Q9BRY0 314 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 SPATA9Q9BWV2 254 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 KAT8Q9H7Z6 458 aaKnown RBP17.5■□□□□ 0.39
DDX39A-204ENST00000586558 ZDHHC11Q9H8X9 412 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 MTHFD2LQ9H903 347 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-204ENST00000586558 PPP4R1LQ9P1A2 415 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 TAGLN3Q9UI15 199 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 MKLN1Q9UL63 735 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 AP3M1Q9Y2T2 418 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 C15orf41Q9Y2V0 281 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 BSNQ9UPA5 3926 aa17.5■□□□□ 0.39
DDX39A-204ENST00000586558 IGLV3-32A0A0A0MS00 114 aa17.49■□□□□ 0.39
DDX39A-204ENST00000586558 NDUFB5O43674 189 aa17.49■□□□□ 0.39
DDX39A-204ENST00000586558 ZIC2O95409 532 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-204ENST00000586558 ANGPTL1O95841 491 aa17.49■□□□□ 0.39
DDX39A-204ENST00000586558 BCHEP06276 602 aa17.49■□□□□ 0.39
DDX39A-204ENST00000586558 CHRM4P08173 479 aa17.49■□□□□ 0.39
DDX39A-204ENST00000586558 ARAFP10398 606 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms