RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 BRINP1O60477 761 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 TPST2O60704 377 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 TNFSF15O95150 251 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 CYP4B1P13584 511 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 CDH2P19022 906 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-204ENST00000586417 CBLP22681 906 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 EPHA2P29317 976 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 RORAP35398 523 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 EEF1A1P68104 462 aaKnown RBP18.93■□□□□ 0.62
ATG4D-204ENST00000586417 SEC23BQ15437 767 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 KCTD21Q4G0X4 260 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 ZNF385CQ66K41 422 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-204ENST00000586417 THAP5Q7Z6K1 395 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 ZAR1Q86SH2 424 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 TAGAPQ8N103 731 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 C16orf52Q8NHV5 167 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 PRRC1Q96M27 445 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 NIPSNAP1Q9BPW8 284 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 MKKSQ9NPJ1 570 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-204ENST00000586417 POLE3Q9NRF9 147 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 MAN2C1Q9NTJ4 1040 aa18.93■□□□□ 0.62
ATG4D-204ENST00000586417 TCRBV16S1A1N1A0A5B0 115 aa18.92■□□□□ 0.62
ATG4D-204ENST00000586417 CLDN24A6NM45 220 aa18.92■□□□□ 0.62
ATG4D-204ENST00000586417 BCKDKO14874 412 aa18.92■□□□□ 0.62
ATG4D-204ENST00000586417 CPNE3O75131 537 aaKnown RBP18.92■□□□□ 0.62
ATG4D-204ENST00000586417 GUSBP08236 651 aa18.92■□□□□ 0.62
ATG4D-204ENST00000586417 IL18R1Q13478 541 aa18.92■□□□□ 0.62
ATG4D-204ENST00000586417 KEAP1Q14145 624 aa18.92■□□□□ 0.62
ATG4D-204ENST00000586417 ZNHIT3Q15649 155 aaPredicted RBP18.92■□□□□ 0.62
ATG4D-204ENST00000586417 MFSD4BQ5TF39 518 aa18.92■□□□□ 0.62
ATG4D-204ENST00000586417 OR4N2Q8NGD1 307 aa18.92■□□□□ 0.62
ATG4D-204ENST00000586417 PMM1Q92871 262 aa18.92■□□□□ 0.62
ATG4D-204ENST00000586417 DDA1Q9BW61 102 aa18.92■□□□□ 0.62
ATG4D-204ENST00000586417 CTSFQ9UBX1 484 aa18.92■□□□□ 0.62
ATG4D-204ENST00000586417 NPIPA5A0A0B4J1W7 369 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 A0A1W2PRQ8 180 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 NPIPA7E9PJI5 369 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 PEX12O00623 359 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 UGT2B11O75310 529 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 UGT2B17O75795 530 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 IGKV1D-16P01601 117 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 DBIP07108 87 aaKnown RBP18.91■□□□□ 0.62
ATG4D-204ENST00000586417 NPIPA8P0DM63 369 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 CT45A8P0DMV1 189 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 CT45A9P0DMV2 189 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 TNNI3P19429 210 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 TRHRP34981 398 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-204ENST00000586417 ISL1P61371 349 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 GABREP78334 506 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 NPRL3Q12980 569 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 RAPSNQ13702 412 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 DGCR6Q14129 220 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 LARS2Q15031 903 aaKnown RBP18.91■□□□□ 0.62
ATG4D-204ENST00000586417 CT45A2Q5DJT8 189 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 FGD3Q5JSP0 725 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 TMEM151BQ8IW70 566 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 OR7G1Q8NGA0 311 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 SLC7A13Q8TCU3 470 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 SENP5Q96HI0 755 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-204ENST00000586417 MRPS26Q9BYN8 205 aaKnown RBP18.91■□□□□ 0.62
ATG4D-204ENST00000586417 PAPOLBQ9NRJ5 636 aaKnown RBP18.91■□□□□ 0.62
ATG4D-204ENST00000586417 PNO1Q9NRX1 252 aaKnown RBP18.91■□□□□ 0.62
ATG4D-204ENST00000586417 SLC13A4Q9UKG4 626 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 NDRG4Q9ULP0 352 aaKnown RBP18.91■□□□□ 0.62
ATG4D-204ENST00000586417 ZNF232Q9UNY5 417 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 AHCTF1Q8WYP5 2266 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 IGLV3-12A0A075B6K2 115 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 MEN1O00255 615 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 STK17BO94768 372 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 HBQ1P09105 142 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 IL7RP16871 459 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 FOXL2P58012 376 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 SMIM11AP58511 58 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 FOXD4Q12950 439 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-204ENST00000586417 NKAIN1Q4KMZ8 207 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 FAM199XQ6PEV8 388 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-204ENST00000586417 LAPTM4BQ86VI4 370 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 ZSCAN1Q8NBB4 408 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 GALNT6Q8NCL4 622 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 PITX2Q99697 317 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 PRR14Q9BWN1 585 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 ITPAQ9BY32 194 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 TGIF2Q9GZN2 237 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 VN1R1Q9GZP7 353 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 POLR1BQ9H9Y6 1135 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 KLHL28Q9NXS3 571 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 POFUT2Q9Y2G5 429 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 PCDHGA3Q9Y5H0 932 aa18.91■□□□□ 0.62
ATG4D-204ENST00000586417 FAAHO00519 579 aa18.9■□□□□ 0.62
ATG4D-204ENST00000586417 NID1P14543 1247 aa18.9■□□□□ 0.62
ATG4D-204ENST00000586417 ELK4P28324 431 aa18.9■□□□□ 0.62
ATG4D-204ENST00000586417 RYKP34925 604 aa18.9■□□□□ 0.62
ATG4D-204ENST00000586417 SLC37A1P57057 533 aa18.9■□□□□ 0.62
ATG4D-204ENST00000586417 CD47Q08722 323 aa18.9■□□□□ 0.62
ATG4D-204ENST00000586417 ELAVL1Q15717 326 aaKnown RBP18.9■□□□□ 0.62
ATG4D-204ENST00000586417 CTU2Q2VPK5 515 aaKnown RBP18.9■□□□□ 0.62
ATG4D-204ENST00000586417 LIN52Q52LA3 116 aa18.9■□□□□ 0.62
ATG4D-204ENST00000586417 DCST1Q5T197 706 aa18.9■□□□□ 0.62
ATG4D-204ENST00000586417 LAIR2Q6ISS4 152 aa18.9■□□□□ 0.62
ATG4D-204ENST00000586417 PRSS58Q8IYP2 241 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms