RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ARGFXA6NJG6 315 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 A8MVJ9 347 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 M0QX08 132 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 KIAA0513O60268 411 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 MFN2O95140 757 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 ALPPP05187 535 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 ATP6V1C1P21283 382 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 PPICP45877 212 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 KCNJ5P48544 419 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 SESN3P58005 492 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 RPS26P62854 115 aaKnown RBP11.68□□□□□ -0.54
VMP1-202ENST00000585847 ZNF267Q14586 743 aaPredicted RBP11.68□□□□□ -0.54
VMP1-202ENST00000585847 RFX4Q33E94 735 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 GPAT3Q53EU6 434 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 TRMT12Q53H54 448 aaKnown RBP11.68□□□□□ -0.54
VMP1-202ENST00000585847 SLC29A4Q7RTT9 530 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 PRICKLE2Q7Z3G6 844 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 ZDHHC13Q8IUH4 622 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 ZDHHC21Q8IVQ6 265 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 CLEC4FQ8N1N0 589 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 LINC00471Q8N535 108 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 OR1N1Q8NGS0 311 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 ELP5Q8TE02 316 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 PSMF1Q92530 271 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 TP53INP1Q96A56 240 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 TAMM41Q96BW9 452 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 ZNF354BQ96LW1 612 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 IP6K3Q96PC2 410 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 SEPHS2Q99611 448 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 CNPPD1Q9BV87 410 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 NUDT9Q9BW91 350 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 SEMA4CQ9C0C4 833 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 FOLH1BQ9HBA9 442 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 GMPR2Q9P2T1 348 aaKnown RBP11.68□□□□□ -0.54
VMP1-202ENST00000585847 ENOPH1Q9UHY7 261 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 FAM32AQ9Y421 112 aaKnown RBP11.68□□□□□ -0.54
VMP1-202ENST00000585847 WDR45Q9Y484 360 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 DTNAQ9Y4J8 743 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 PCDHGA10Q9Y5H3 936 aa11.68□□□□□ -0.54
VMP1-202ENST00000585847 TNRC6AQ8NDV7 1962 aaKnown RBP11.67□□□□□ -0.54
VMP1-202ENST00000585847 ARRDC5A6NEK1 342 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 FRG2CA6NGY1 282 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 PYCARD-AS1I3L0S3 204 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 GNGT2O14610 69 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 TO15178 435 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 PRKNO60260 465 aaPredicted RBP11.67□□□□□ -0.54
VMP1-202ENST00000585847 FMO6PO60774 539 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 DNAJB5O75953 348 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 CST1P01037 141 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 ITGAMP11215 1152 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 RHCEP18577 417 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 DRD5P21918 477 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 EMDP50402 254 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 SOX8P57073 446 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 TBR1Q16650 682 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 DUSP5Q16690 384 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 LINC00303Q3SY05 128 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 DCST2Q5T1A1 773 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 HLA-DQA1Q5Y7H0 255 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 PLAG1Q6DJT9 500 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 APLFQ8IW19 511 aaPredicted RBP11.67□□□□□ -0.54
VMP1-202ENST00000585847 ZNF619Q8N2I2 560 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 ZNF615Q8N8J6 731 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 ZSCAN1Q8NBB4 408 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 SLC16A11Q8NCK7 471 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 ICA1LQ8NDH6 482 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 B3GNT7Q8NFL0 401 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 OR5D16Q8NGK9 328 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 OR5L2Q8NGL0 311 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 M1APQ8TC57 530 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 SLC2A12Q8TD20 617 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 SLC9A6Q92581 669 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 TTC9Q92623 222 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 HSPBAP1Q96EW2 488 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 SENP5Q96HI0 755 aaPredicted RBP11.67□□□□□ -0.54
VMP1-202ENST00000585847 MAGED4Q96JG8 741 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 COL21A1Q96P44 957 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 EPYCQ99645 322 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 LPAR4Q99677 370 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 PKP2Q99959 881 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 SLC38A1Q9H2H9 487 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 ANKRD19PQ9H560 264 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 REEP1Q9H902 201 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 ANKRA2Q9H9E1 313 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 MMP25Q9NPA2 562 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 EQTNQ9NQ60 294 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 USP22Q9UPT9 525 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 ERVK-19Q9WJR5 959 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 COL6A6A6NMZ7 2263 aa11.67□□□□□ -0.54
VMP1-202ENST00000585847 AGAP5A6NIR3 686 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 TMEM200CA6NKL6 621 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 PEX12O00623 359 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 TIPRLO75663 272 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 CEACAM4O75871 244 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 H6PDO95479 791 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 NGFRP08138 427 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 CHRM4P08173 479 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 PABPC4LP0CB38 370 aaKnown RBP11.66□□□□□ -0.54
VMP1-202ENST00000585847 ACP2P11117 423 aa11.66□□□□□ -0.54
VMP1-202ENST00000585847 ACADSP16219 412 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms