RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PRDM4Q9UKN5 801 aa12.6□□□□□ -0.39
PRKCSH-202ENST00000585540 LIPT1Q9Y234 373 aa12.6□□□□□ -0.39
PRKCSH-202ENST00000585540 MEMO1Q9Y316 297 aa12.6□□□□□ -0.39
PRKCSH-202ENST00000585540 A0A087WZY1 265 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 GXYLT2A0PJZ3 443 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 CCDC154A6NI56 674 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 CCL21O00585 134 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 SEMA7AO75326 666 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 CPSF4O95639 269 aaKnown RBP12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 OXSR1O95747 527 aaPredicted RBP12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 CHMP24386 653 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 LSP1P33241 339 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 CHI3L1P36222 383 aaPredicted RBP12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 DGKQP52824 942 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 ARFIP2P53365 341 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 SEC24CP53992 1094 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 SRSF1Q07955 248 aaKnown RBP eCLIP12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 ZNF630Q2M218 657 aaPredicted RBP12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 ARHGAP11BQ3KRB8 267 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 C1QL3Q5VWW1 255 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 BICRALQ6AI39 1079 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 CD163Q86VB7 1156 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 FJX1Q86VR8 437 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 ANKRD46Q86W74 232 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 WDSUB1Q8N9V3 476 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 TOR1AIP2Q8NFQ8 470 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 CDS1Q92903 461 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 GNRHR2Q96P88 292 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 SLC35A5Q9BS91 424 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 NMUR2Q9GZQ4 415 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 GALNT9Q9HCQ5 603 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 STOML1Q9UBI4 398 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 DKKL1Q9UK85 242 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 DNAJC13O75165 2243 aa12.59□□□□□ -0.39
PRKCSH-202ENST00000585540 NUP214P35658 2090 aaPredicted RBP12.58□□□□□ -0.39
PRKCSH-202ENST00000585540 AHRRA9YTQ3 701 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 NDUFB5O43674 189 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 STX11O75558 287 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 TRAPPC6AO75865 159 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 ANP32DO95626 131 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 ANGPTL1O95841 491 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 RFPL3SP0C7P2 107 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 CD1EP15812 388 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 PPIBP23284 216 aaKnown RBP12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 RFX3P48380 749 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 ATP12AP54707 1039 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 HPCAP84074 193 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 HSF1Q00613 529 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 TOMM20Q15388 145 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 GRAMD1BQ3KR37 738 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 VASNQ6EMK4 673 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 HEPHL1Q6MZM0 1159 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 C16orf62Q7Z3J2 963 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 FGD2Q7Z6J4 655 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 IFNEQ86WN2 208 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 DOLPP1Q86YN1 238 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 OR5AK3PQ8NH89 298 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 C10orf82Q8WW14 230 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 C16orf58Q96GQ5 468 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 PRDM14Q9GZV8 571 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 ZNF350Q9GZX5 532 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 ZNF385DQ9H6B1 395 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 COQ3Q9NZJ6 369 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 CALML5Q9NZT1 146 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 KLHL14Q9P2G3 628 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 TINAGQ9UJW2 476 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 ACAD8Q9UKU7 415 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 LIPGQ9Y5X9 500 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 GMEB1Q9Y692 573 aa12.58□□□□□ -0.4
PRKCSH-202ENST00000585540 ZNF407Q9C0G0 2248 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 C15orf38-AP3S2A0A0A6YYH1 394 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 NPIPA2E9PIF3 369 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 NPIPA3F8WFD2 350 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 SCO2O43819 266 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 ZIC2O95409 532 aaPredicted RBP12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 IGKV1D-16P01601 117 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 ZNF17P17021 662 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 NCF2P19878 526 aaPredicted RBP12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 ACVR2AP27037 513 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 ADSLP30566 484 aaPredicted RBP12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 DCTP40126 519 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 CRYZQ08257 329 aaKnown RBP12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 FADDQ13158 208 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 GNA13Q14344 377 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 BCL2A1Q16548 175 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 GXYLT1Q4G148 440 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 FLYWCH1Q4VC44 716 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 FIGNL1Q6PIW4 674 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 BLOC1S3Q6QNY0 202 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 WDR53Q7Z5U6 358 aaPredicted RBP12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 FAM83FQ8NEG4 500 aaPredicted RBP12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 OR2M3Q8NG83 312 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 OR14L1PQ8NHC6 308 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 FBXO30Q8TB52 745 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 ASB5Q8WWX0 329 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 CCDC120Q96HB5 630 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 DMRTA2Q96SC8 542 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 SDF2Q99470 211 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 FAM107BQ9H098 131 aa12.57□□□□□ -0.4
PRKCSH-202ENST00000585540 SLC6A15Q9H2J7 730 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms