RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 MAP3K8P41279 467 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 PKNOX1P55347 436 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 PPP2R2BQ00005 443 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 ZNF155Q12901 538 aaPredicted RBP12.96□□□□□ -0.33
SDF2-202ENST00000585428 STX5Q13190 355 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 EXOC3L2Q2M3D2 409 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 C8orf74Q6P047 294 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 TMEM107Q6UX40 140 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 ZNF704Q6ZNC4 412 aaPredicted RBP12.96□□□□□ -0.33
SDF2-202ENST00000585428 ZNF611Q8N823 705 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 OR6K3Q8NGY3 331 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 L3HYPDHQ96EM0 354 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 ADGRG7Q96K78 797 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 AMDHD1Q96NU7 426 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 EBPLQ9BY08 206 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 OR10A4Q9H209 315 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 Q9N2J8 555 aa12.96□□□□□ -0.33
SDF2-202ENST00000585428 ARID1AO14497 2285 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 SHISA8B8ZZ34 492 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 UBFD1O14562 309 aaKnown RBP12.95□□□□□ -0.34
SDF2-202ENST00000585428 SS18L1O75177 396 aaPredicted RBP12.95□□□□□ -0.34
SDF2-202ENST00000585428 CRLF1O75462 422 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 IFI6P09912 130 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 PSMA4P25789 261 aaKnown RBP12.95□□□□□ -0.34
SDF2-202ENST00000585428 GCAP28676 217 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 ECHS1P30084 290 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 GABRA3P34903 492 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 PSMD4P55036 377 aaKnown RBP12.95□□□□□ -0.34
SDF2-202ENST00000585428 NR1H2P55055 460 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 KRTAP1-1Q07627 177 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 ZNF763Q0D2J5 394 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 LCP2Q13094 533 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 TNK1Q13470 666 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 CTU2Q2VPK5 515 aaKnown RBP12.95□□□□□ -0.34
SDF2-202ENST00000585428 LGSNQ5TDP6 509 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 CXXC5Q7LFL8 322 aaKnown RBP12.95□□□□□ -0.34
SDF2-202ENST00000585428 TRIM46Q7Z4K8 759 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 LCA5Q86VQ0 697 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 SLC22A9Q8IVM8 553 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 OR4C3Q8NH37 302 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 LILRB1Q8NHL6 650 aaPredicted RBP12.95□□□□□ -0.34
SDF2-202ENST00000585428 FAM76AQ8TAV0 307 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 TMEM171Q8WVE6 324 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 KCNA7Q96RP8 456 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 NPAS1Q99742 590 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 TBL1XR1Q9BZK7 514 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 GLRX2Q9NS18 164 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 PAQR5Q9NXK6 330 aaPredicted RBP12.95□□□□□ -0.34
SDF2-202ENST00000585428 STOML1Q9UBI4 398 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 STK38LQ9Y2H1 464 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 EMC9Q9Y3B6 208 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 JMJD1CQ15652 2540 aa12.95□□□□□ -0.34
SDF2-202ENST00000585428 RAI1Q7Z5J4 1906 aaPredicted RBP12.94□□□□□ -0.34
SDF2-202ENST00000585428 GXYLT2A0PJZ3 443 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 CCDC151A5D8V7 595 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 TTC36A6NLP5 189 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 OVOL3O00110 214 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 EIF1AYO14602 144 aaKnown RBP12.94□□□□□ -0.34
SDF2-202ENST00000585428 HS3ST1O14792 307 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 EIF1AXP47813 144 aaKnown RBP12.94□□□□□ -0.34
SDF2-202ENST00000585428 FOXA1P55317 472 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 RAC1P63000 192 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 ZNHIT3Q15649 155 aaPredicted RBP12.94□□□□□ -0.34
SDF2-202ENST00000585428 GRAMD1BQ3KR37 738 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 SPDYAQ5MJ70 313 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 CPTPQ5TA50 214 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 MFSD12Q6NUT3 480 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 ADAM5Q6NVV9 412 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 BEND4Q6ZU67 534 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 WDR75Q8IWA0 830 aaKnown RBP12.94□□□□□ -0.34
SDF2-202ENST00000585428 GTPBP8Q8N3Z3 284 aaPredicted RBP12.94□□□□□ -0.34
SDF2-202ENST00000585428 OR10D3Q8NH80 312 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 FAM110BQ8TC76 370 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 PLPPR2Q96GM1 343 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 PRRG4Q9BZD6 226 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 GSTO2Q9H4Y5 243 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 CXorf56Q9H5V9 222 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 MYNNQ9NPC7 610 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 DDX18Q9NVP1 670 aaKnown RBP12.94□□□□□ -0.34
SDF2-202ENST00000585428 CLEC4AQ9UMR7 237 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 GPR52Q9Y2T5 361 aa12.94□□□□□ -0.34
SDF2-202ENST00000585428 A0A087WUV0 522 aaPredicted RBP12.93□□□□□ -0.34
SDF2-202ENST00000585428 A0A087WZY1 265 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 C7orf72A4D263 438 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 ALG1L2C9J202 215 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 NGFRP08138 427 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 NID1P14543 1247 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 ZNF17P17021 662 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 PSMB1P20618 241 aaKnown RBP12.93□□□□□ -0.34
SDF2-202ENST00000585428 CTBP2P56545 445 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 KIAA0040Q15053 153 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 EXOC3L1Q86VI1 746 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 C17orf53Q8N3J3 647 aaPredicted RBP12.93□□□□□ -0.34
SDF2-202ENST00000585428 MMGT1Q8N4V1 131 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 LRRN4CLQ8ND94 238 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 ACTRT2Q8TDY3 377 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 IFT81Q8WYA0 676 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 PIK3R3Q92569 461 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 EGLN2Q96KS0 407 aa12.93□□□□□ -0.34
SDF2-202ENST00000585428 FMO2Q99518 471 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms