RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ERG	P11308	486 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	PPP2R1B	P30154	601 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	GABRA5	P31644	462 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	CDKN2B	P42772	138 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	SCTR	P47872	440 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	ROR2	Q01974	943 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	GBE1	Q04446	702 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	CALCOCO2	Q13137	446 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	CTBP1	Q13363	440 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	FASTKD3	Q14CZ7	662 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	OASL	Q15646	514 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	STK11	Q15831	433 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	FAM182A	Q5T1J6	154 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	C1QTNF12	Q5T7M4	302 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	DEPDC1	Q5TB30	811 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	ANKRD22	Q5VYY1	191 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	LGALS9C	Q6DKI2	356 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	ZNF470	Q6ECI4	717 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	DNAJC24	Q6P3W2	148 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	RNF111	Q6ZNA4	994 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	C8orf86	Q6ZUL3	223 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	CCDC121	Q6ZUS5	278 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	MICALCL	Q6ZW33	695 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	LDLRAD3	Q86YD5	345 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	CCDC50	Q8IVM0	306 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	LYG1	Q8N1E2	194 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	KLHDC1	Q8N7A1	406 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	ZNF321P	Q8N8H1	164 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	OR52E2	Q8NGJ4	325 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	MGARP	Q8TDB4	240 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	MAIP1	Q8WWC4	291 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	CKAP2	Q8WWK9	683 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	LRTOMT	Q8WZ04	291 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	RDH5	Q92781	318 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	HAUS1	Q96CS2	278 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	FAM81B	Q96LP2	452 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	SERPINB12	Q96P63	405 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	MCEE	Q96PE7	176 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	DOK1	Q99704	481 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	ELAC2	Q9BQ52	826 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	PSD2	Q9BQI7	771 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	MRI1	Q9BV20	369 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	MRPS30	Q9NP92	439 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	PNO1	Q9NRX1	252 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	CA10	Q9NS85	328 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	ABCF3	Q9NUQ8	709 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	INTS9	Q9NV88	658 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	RBM22	Q9NW64	420 aa	Known RBP eCLIP	4.17	□□□□□ -1.74	1e-8	■■□□□ 12.4
MSI2-216	ENST00000582772	TEX10	Q9NXF1	929 aa	Predicted RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	IP6K2	Q9UHH9	426 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	SLC39A10	Q9ULF5	831 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	CLEC4A	Q9UMR7	237 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	EXO1	Q9UQ84	846 aa	Known RBP	4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	INSIG2	Q9Y5U4	225 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	CLCA3P	Q9Y6N3	262 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	USH1C	Q9Y6N9	552 aa		4.17	□□□□□ -1.74
MSI2-216	ENST00000582772	TCRBV7S3A2	A0A539	114 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	EPM2A	B3EWF7	344 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	ATP6V1G2-DDX39B	F2Z307	99 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	GNB5	O14775	395 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	HAT1	O14929	419 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SNX3	O60493	162 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	FBXO24	O75426	580 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	DNAJC8	O75937	253 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	UBOX5	O94941	541 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	LSM8	O95777	96 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	GAS8	O95995	478 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	THY1	P04216	161 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	CALB1	P05937	261 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	VIM	P08670	466 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	ABHD2	P08910	425 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	OR4A8	P0C604	315 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	RNH1	P13489	461 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	MTHFD2	P13995	350 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	PECAM1	P16284	738 aa	Predicted RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	TNNI3	P19429	210 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	GGT1	P19440	569 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	TAC1	P20366	129 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	FAS	P25445	335 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	TIA1	P31483	386 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	PTPN7	P35236	360 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	TGFBR2	P37173	567 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SSR1	P43307	286 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	MAGEA4	P43358	317 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	GATA4	P43694	442 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	GSK3A	P49840	483 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	ZNF83	P51522	516 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SUCLG1	P53597	346 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	HSD17B7	P56937	341 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	WDR4	P57081	412 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	GPX6	P59796	221 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	RPP38	P78345	283 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	SLC25A11	Q02978	314 aa	Known RBP	4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	CAV1	Q03135	178 aa		4.16	□□□□□ -1.74
MSI2-216	ENST00000582772	PAX8	Q06710	450 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms