RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 ZNHIT3Q15649 155 aaPredicted RBP18.95■□□□□ 0.62
CCDC42-203ENST00000581598 DECR1Q16698 335 aa18.95■□□□□ 0.62
CCDC42-203ENST00000581598 CGB2Q6NT52 195 aa18.95■□□□□ 0.62
CCDC42-203ENST00000581598 OR4K17Q8NGC6 315 aa18.95■□□□□ 0.62
CCDC42-203ENST00000581598 AGR3Q8TD06 166 aa18.95■□□□□ 0.62
CCDC42-203ENST00000581598 EGLN2Q96KS0 407 aa18.95■□□□□ 0.62
CCDC42-203ENST00000581598 GPATCH1Q9BRR8 931 aaKnown RBP18.95■□□□□ 0.62
CCDC42-203ENST00000581598 CLEC4MQ9H2X3 399 aaPredicted RBP18.95■□□□□ 0.62
CCDC42-203ENST00000581598 SDHAF3Q9NRP4 125 aa18.95■□□□□ 0.62
CCDC42-203ENST00000581598 C1orf109Q9NX04 203 aa18.95■□□□□ 0.62
CCDC42-203ENST00000581598 PPP4R1LQ9P1A2 415 aa18.95■□□□□ 0.62
CCDC42-203ENST00000581598 MARCOQ9UEW3 520 aaPredicted RBP18.95■□□□□ 0.62
CCDC42-203ENST00000581598 DNAJC15Q9Y5T4 150 aa18.95■□□□□ 0.62
CCDC42-203ENST00000581598 TUBAL3A6NHL2 446 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 ZNF195O14628 629 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 IL33O95760 270 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 EPXP11678 715 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 TACR1P25103 407 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 STARP49675 285 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 ART1P52961 327 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 IST1P53990 364 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 PSMD4P55036 377 aaKnown RBP18.94■□□□□ 0.62
CCDC42-203ENST00000581598 B3GALT5-AS1P59052 145 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 SRYQ05066 204 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 GAB1Q13480 694 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 GANABQ14697 944 aaKnown RBP18.94■□□□□ 0.62
CCDC42-203ENST00000581598 OR5M10Q6IEU7 315 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 Q6ZSR9 355 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 OR2M3Q8NG83 312 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 HOXB13Q92826 284 aaPredicted RBP18.94■□□□□ 0.62
CCDC42-203ENST00000581598 CCT7Q99832 543 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 FOXC2Q99958 501 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 CXXC4Q9H2H0 198 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 C3orf14Q9HBI5 128 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 LRTM1Q9HBL6 345 aa18.94■□□□□ 0.62
CCDC42-203ENST00000581598 FAM120CQ9NX05 1096 aaKnown RBP18.94■□□□□ 0.62
CCDC42-203ENST00000581598 PCNX3Q9H6A9 2034 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 EEF1E1-BLOC1S5C9J1V9 151 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 LINC01387J3KSC0 135 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 HDAC3O15379 428 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 EEF1E1O43324 174 aaKnown RBP18.93■□□□□ 0.62
CCDC42-203ENST00000581598 AGFG1P52594 562 aaKnown RBP18.93■□□□□ 0.62
CCDC42-203ENST00000581598 FOXF2Q12947 444 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 WDR75Q8IWA0 830 aaKnown RBP18.93■□□□□ 0.62
CCDC42-203ENST00000581598 TWIST2Q8WVJ9 160 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 NRGNQ92686 78 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 PIGMQ9H3S5 423 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 TUBB1Q9H4B7 451 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 ST6GALNAC2Q9UJ37 374 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 EDARQ9UNE0 448 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 TMED5Q9Y3A6 229 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 USH1CQ9Y6N9 552 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 ABCA4P78363 2273 aa18.93■□□□□ 0.62
CCDC42-203ENST00000581598 SCO2O43819 266 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 CHEK2O96017 543 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 KITP10721 976 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 PEPDP12955 493 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 MAP3K8P41279 467 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 FRKP42685 505 aaPredicted RBP18.92■□□□□ 0.62
CCDC42-203ENST00000581598 CLK3P49761 638 aaKnown RBP18.92■□□□□ 0.62
CCDC42-203ENST00000581598 MAVSQ7Z434 540 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 CDC20BQ86Y33 519 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 OR2T11Q8NH01 316 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 GOT1L1Q8NHS2 421 aaPredicted RBP18.92■□□□□ 0.62
CCDC42-203ENST00000581598 STON2Q8WXE9 905 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 SIKE1Q9BRV8 207 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 NSRP1Q9H0G5 558 aaKnown RBP18.92■□□□□ 0.62
CCDC42-203ENST00000581598 DSN1Q9H410 356 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 NTMQ9P121 344 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 FIS1Q9Y3D6 152 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 PTGDR2Q9Y5Y4 395 aa18.92■□□□□ 0.62
CCDC42-203ENST00000581598 SETD2Q9BYW2 2564 aaPredicted RBP18.92■□□□□ 0.62
CCDC42-203ENST00000581598 PRRC2AP48634 2157 aaKnown RBP18.91■□□□□ 0.62
CCDC42-203ENST00000581598 IGLV3-32A0A0A0MS00 114 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 PDPK1O15530 556 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 CRHP06850 196 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 TROVE2P10155 538 aaKnown RBP eCLIP18.91■□□□□ 0.62
CCDC42-203ENST00000581598 PRPS2P11908 318 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 PCYT1AP49585 367 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 PDE7AQ13946 482 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 GLYR1Q49A26 553 aaPredicted RBP18.91■□□□□ 0.62
CCDC42-203ENST00000581598 XKR7Q5GH72 579 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 ZNF551Q7Z340 670 aaPredicted RBP18.91■□□□□ 0.62
CCDC42-203ENST00000581598 GRAMD2AQ8IUY3 354 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 ZFP28Q8NHY6 868 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 INTS12Q96CB8 462 aaKnown RBP18.91■□□□□ 0.62
CCDC42-203ENST00000581598 RMND5BQ96G75 393 aaPredicted RBP18.91■□□□□ 0.62
CCDC42-203ENST00000581598 RBM24Q9BX46 236 aaKnown RBP18.91■□□□□ 0.62
CCDC42-203ENST00000581598 REEP4Q9H6H4 257 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 PTGES2Q9H7Z7 377 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 MEAF6Q9HAF1 191 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 FLRT3Q9NZU0 649 aa18.91■□□□□ 0.62
CCDC42-203ENST00000581598 RPH3AQ9Y2J0 694 aaPredicted RBP18.91■□□□□ 0.62
CCDC42-203ENST00000581598 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 C17orf51A8MQB3 221 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 PIP5K1BO14986 540 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 LSM1O15116 133 aaKnown RBP18.9■□□□□ 0.62
CCDC42-203ENST00000581598 TNFSF13O75888 250 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 NKX2-2O95096 273 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 SDC1P18827 310 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms