RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 CDRT4Q8N9R6 151 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 SLC16A11Q8NCK7 471 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 MTERF3Q96E29 417 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 C16orf58Q96GQ5 468 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 C3orf30Q96M34 536 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 RBM24Q9BX46 236 aaKnown RBP19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 ZDHHC2Q9UIJ5 367 aa19.23■□□□□ 0.67
CSNK1D-215ENST00000580784 OR2M5A3KFT3 312 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 EMC8O43402 210 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 EPXP11678 715 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 SORDQ00796 357 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 GANABQ14697 944 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 XKR7Q5GH72 579 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 R3HCC1LQ7Z5L2 792 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 CDC20BQ86Y33 519 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 OR7A2PQ8NGA2 310 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 OR4C3Q8NH37 302 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 C1GALT1C1Q96EU7 318 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 PPP3R2Q96LZ3 170 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 ACBD3Q9H3P7 528 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 GALNT8Q9NY28 637 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 ATP6V1HQ9UI12 483 aa19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 V9GYY5 206 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 PRRC2AP48634 2157 aaKnown RBP19.22■□□□□ 0.67
CSNK1D-215ENST00000580784 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 TMEM114B3SHH9 223 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 H3BML4 177 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 TYROBPO43914 113 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 TNFSF13O75888 250 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 DUSP5Q16690 384 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 MFSD12Q6NUT3 480 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 WDR93Q6P2C0 686 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 FIGNL1Q6PIW4 674 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 LRIG3Q6UXM1 1119 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 P4HA3Q7Z4N8 544 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 MEIOBQ8N635 442 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 FAM110BQ8TC76 370 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 NUDT8Q8WV74 236 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 CAVIN3Q969G5 261 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 OTUB1Q96FW1 271 aaPredicted RBP19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 MS4A4EQ96PG1 132 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 YIPF4Q9BSR8 244 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 C1orf50Q9BV19 199 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 FBXO34Q9NWN3 711 aa19.21■□□□□ 0.67
CSNK1D-215ENST00000580784 IGLV3-32A0A0A0MS00 114 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 A0A1W2PNV4 684 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 SLC22A20A6NK97 555 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 SHISA8B8ZZ34 492 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 SCAMP2O15127 329 aaKnown RBP19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 SEC14L5O43304 696 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 SKAP2O75563 359 aaPredicted RBP19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 KCNK2O95069 426 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 BPGMP07738 259 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 LAMP1P11279 417 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 MAPK1P28482 360 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 SERPINB5P36952 375 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 HPCAL1P37235 193 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 CPA2P48052 419 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 CLDN20P56880 219 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 PTGR1Q14914 329 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 GLYR1Q49A26 553 aaPredicted RBP19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 ATP6AP1LQ52LC2 224 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 C6orf136Q5SQH8 315 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 ZAR1Q86SH2 424 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 OR6Y1Q8NGX8 325 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 GOT1L1Q8NHS2 421 aaPredicted RBP19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 FIG4Q92562 907 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 FAM120BQ96EK7 910 aaKnown RBP19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 PIGQQ9BRB3 760 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 PIGMQ9H3S5 423 aa19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 SIRT3Q9NTG7 399 aaPredicted RBP19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 CCM2LQ9NUG4 571 aaPredicted RBP19.2■□□□□ 0.66
CSNK1D-215ENST00000580784 A0A1W2PRB8 838 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 A8MXE2 369 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 ALG1L2C9J202 215 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 LINC01387J3KSC0 135 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 NDUFB5O43674 189 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 OXSR1O95747 527 aaPredicted RBP19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 ALOX5P09917 674 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 CD1EP15812 388 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 ETV4P43268 484 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 EEFSECP57772 596 aaKnown RBP19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 EEF1A1P68104 462 aaKnown RBP19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 MLC1Q15049 377 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 EEF1A1P5Q5VTE0 462 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 IL23RQ5VWK5 629 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 ZCCHC12Q6PEW1 402 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 GATSQ8NAP1 163 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 TMEM109Q9BVC6 243 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 PINK1Q9BXM7 581 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 ZCCHC3Q9NUD5 404 aaKnown RBP19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 ST6GALNAC2Q9UJ37 374 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 PACSIN3Q9UKS6 424 aa19.19■□□□□ 0.66
CSNK1D-215ENST00000580784 TNFRSF21O75509 655 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 HMGN2P05204 90 aaKnown RBP19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 TBXA2RP21731 343 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 RPL3P39023 403 aaKnown RBP19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 DIO3P55073 304 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms