RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 CORO1CQ9ULV4 474 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 GPR55Q9Y2T6 319 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 GRIP1Q9Y3R0 1128 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 OARD1Q9Y530 152 aa12.29□□□□□ -0.44
CSNK1D-213ENST00000580446 AP3B1O00203 1094 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 WNT9BO14905 357 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 TO15178 435 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 IL33O95760 270 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 BCL10O95999 233 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 CCDC175P0C221 793 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 IFNGR1P15260 489 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 GIFP27352 417 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 KRT20P35900 424 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 CASP2P42575 452 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 ZNF239Q16600 458 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 PDK4Q16654 411 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 HIST2H2ACQ16777 129 aaPredicted RBP12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 TMEM44Q2T9K0 475 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 HIST2H2AA3Q6FI13 130 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 Q6ZT83 130 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 EXOC3L1Q86VI1 746 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 TDRPQ86YL5 185 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 WDR75Q8IWA0 830 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 OR7G3Q8NG95 312 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 OR4K14Q8NGD5 310 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 UHMK1Q8TAS1 419 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 SLC9A6Q92581 669 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 WDR34Q96EX3 536 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 CMTM7Q96FZ5 175 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 KLHDC3Q9BQ90 382 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 WDR41Q9HAD4 459 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 MYOZ1Q9NP98 299 aaPredicted RBP12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 ACSS1Q9NUB1 689 aaPredicted RBP12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 TREM2Q9NZC2 230 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 MCM8Q9UJA3 840 aa12.28□□□□□ -0.44
CSNK1D-213ENST00000580446 ERAL1O75616 437 aaKnown RBP12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 MSMBP08118 114 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 CTAGE8P0CG41 777 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 SFTPDP35247 375 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 BSGP35613 385 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 HNMTP50135 292 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 SARNPP82979 210 aaKnown RBP12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 EFR3AQ14156 821 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 OCLNQ16625 522 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 PAGE2BQ5JRK9 111 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 KLHL17Q6TDP4 642 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 CTAGE4Q8IX94 777 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 SIGLECL1Q8N7X8 197 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 HUS1BQ8NHY5 278 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 CALML6Q8TD86 181 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 ANKRD49Q8WVL7 239 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 MMP27Q9H306 513 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 CXorf36Q9H7Y0 433 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 PTGES2Q9H7Z7 377 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 LYARQ9NX58 379 aaKnown RBP12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 MOKQ9UQ07 419 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 SLC25A15Q9Y619 301 aa12.27□□□□□ -0.45
CSNK1D-213ENST00000580446 ARFGEF3Q5TH69 2177 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 DNAJC9-AS1A6NH13 148 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 ADAMDEC1O15204 470 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 CCNT2O60583 730 aaKnown RBP12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 CT45A8P0DMV1 189 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 CT45A9P0DMV2 189 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 PORP16435 677 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 ZNF17P17021 662 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 KCNJ1P48048 391 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 FOXG1P55316 489 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 CDKL1Q00532 357 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 CT45A2Q5DJT8 189 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 SH2D4BQ5SQS7 431 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 MED27Q6P2C8 311 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 VHLLQ6RSH7 139 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 GSTA5Q7RTV2 222 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 PEX26Q7Z412 305 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 UBL4BQ8N7F7 174 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 ZNF433Q8N7K0 673 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 TOR1AIP2Q8NFQ8 470 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 CLDND2Q8NHS1 167 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 RNF217Q8TC41 542 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 FAM110BQ8TC76 370 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 RNF145Q96MT1 663 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 SAP130Q9H0E3 1048 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 ZNF639Q9UID6 485 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 CFL2Q9Y281 166 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 CORINQ9Y5Q5 1042 aa12.26□□□□□ -0.45
CSNK1D-213ENST00000580446 FADS1O60427 444 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 PGM3O95394 542 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 PNPP00491 289 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 ZNF37AP17032 561 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 OR3A2P47893 321 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 RFX3P48380 749 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 CARD18P57730 90 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 GPX6P59796 221 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 ZNF628Q5EBL2 1059 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 SLC44A2Q8IWA5 706 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 LAS2Q8IYD9 372 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 EXT2Q93063 718 aa12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 REXO5Q96IC2 774 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 C1orf147Q96MC9 270 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-213ENST00000580446 USB1Q9BQ65 265 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms