RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 MRGBPQ9NV56 204 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 PCDHGB3Q9Y5G1 929 aa17.63■□□□□ 0.41
LIMD2-209ENST00000580222 A0A1W2PRB8 838 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 MBD3L4A6NDZ8 208 aaPredicted RBP17.62■□□□□ 0.41
LIMD2-209ENST00000580222 MBD3L5A6NJ08 208 aaPredicted RBP17.62■□□□□ 0.41
LIMD2-209ENST00000580222 P04436 131 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 EFNA1P20827 205 aaPredicted RBP17.62■□□□□ 0.41
LIMD2-209ENST00000580222 GPC1P35052 558 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 POLR2JP52435 117 aaKnown RBP17.62■□□□□ 0.41
LIMD2-209ENST00000580222 MANFP55145 182 aaKnown RBP17.62■□□□□ 0.41
LIMD2-209ENST00000580222 SORDQ00796 357 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 ZNF267Q14586 743 aaPredicted RBP17.62■□□□□ 0.41
LIMD2-209ENST00000580222 AGKQ53H12 422 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 PRSS57Q6UWY2 283 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 PIGWQ7Z7B1 504 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 MORN4Q8NDC4 146 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 ADCY4Q8NFM4 1077 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 OR8J2Q8NGG1 315 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 SLC2A12Q8TD20 617 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 PERPQ96FX8 193 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 SGCZQ96LD1 299 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 AMDHD1Q96NU7 426 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 PIP5K1AQ99755 562 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 OR8D2Q9GZM6 311 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 CXorf21Q9HAI6 301 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 MAT2BQ9NZL9 334 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 CCDC167Q9P0B6 97 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 COPS7AQ9UBW8 275 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 ERVK-19Q9WJR5 959 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 NPFFR2Q9Y5X5 522 aa17.62■□□□□ 0.41
LIMD2-209ENST00000580222 FAM234BA2RU67 622 aa17.61■□□□□ 0.41
LIMD2-209ENST00000580222 EEF1E1-BLOC1S5C9J1V9 151 aa17.61■□□□□ 0.41
LIMD2-209ENST00000580222 NR5A2O00482 541 aa17.61■□□□□ 0.41
LIMD2-209ENST00000580222 SIAH2O43255 324 aa17.61■□□□□ 0.41
LIMD2-209ENST00000580222 EEF1E1O43324 174 aaKnown RBP17.61■□□□□ 0.41
LIMD2-209ENST00000580222 CT62P0C5K7 136 aa17.61■□□□□ 0.41
LIMD2-209ENST00000580222 FRKP42685 505 aaPredicted RBP17.61■□□□□ 0.41
LIMD2-209ENST00000580222 PRICKLE4Q2TBC4 344 aa17.61■□□□□ 0.41
LIMD2-209ENST00000580222 ZNF791Q3KP31 576 aaPredicted RBP17.61■□□□□ 0.41
LIMD2-209ENST00000580222 ANXA8L1Q5VT79 327 aa17.61■□□□□ 0.41
LIMD2-209ENST00000580222 ZNF551Q7Z340 670 aaPredicted RBP17.61■□□□□ 0.41
LIMD2-209ENST00000580222 ZNF675Q8TD23 568 aa17.61■□□□□ 0.41
LIMD2-209ENST00000580222 TIMP4Q99727 224 aa17.61■□□□□ 0.41
LIMD2-209ENST00000580222 ACKR4Q9NPB9 350 aa17.61■□□□□ 0.41
LIMD2-209ENST00000580222 ACSS1Q9NUB1 689 aaPredicted RBP17.61■□□□□ 0.41
LIMD2-209ENST00000580222 FAM120CQ9NX05 1096 aaKnown RBP17.61■□□□□ 0.41
LIMD2-209ENST00000580222 ARL2BPQ9Y2Y0 163 aa17.61■□□□□ 0.41
LIMD2-209ENST00000580222 EML6Q6ZMW3 1958 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 AHRRA9YTQ3 701 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 CFLARO15519 480 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 CCDC22O60826 627 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 GOSR1O95249 250 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 C6orf47O95873 294 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 IL6P05231 212 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 PGRP06401 933 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 RNF4P78317 190 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 MRPS35P82673 323 aaKnown RBP17.6■□□□□ 0.41
LIMD2-209ENST00000580222 CRYZQ08257 329 aaKnown RBP17.6■□□□□ 0.41
LIMD2-209ENST00000580222 TIGD2Q4W5G0 525 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 ZNF628Q5EBL2 1059 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 GKAP1Q5VSY0 366 aaPredicted RBP17.6■□□□□ 0.41
LIMD2-209ENST00000580222 PRAMEF20Q5VT98 475 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 FAM111BQ6SJ93 734 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 LYPD8Q6UX82 237 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 LACC1Q8IV20 430 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 VPS37AQ8NEZ2 397 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 OR5P2Q8WZ92 322 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 KAT2AQ92830 837 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 FBXL20Q96IG2 436 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 DACH2Q96NX9 599 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 NMUR2Q9GZQ4 415 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 ZFP64Q9NPA5 681 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 SAR1AQ9NR31 198 aa17.6■□□□□ 0.41
LIMD2-209ENST00000580222 CCDC154A6NI56 674 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 RNASET2O00584 256 aaKnown RBP17.59■□□□□ 0.41
LIMD2-209ENST00000580222 NDUFAB1O14561 156 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 SLITRK5O94991 958 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 IL2RAP01589 272 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 ABCB1P08183 1280 aaPredicted RBP17.59■□□□□ 0.41
LIMD2-209ENST00000580222 NID1P14543 1247 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 MC3RP41968 323 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 CDK9P50750 372 aaKnown RBP17.59■□□□□ 0.41
LIMD2-209ENST00000580222 MAP4K2Q12851 820 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 DUSP8Q13202 625 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 RCAN2Q14206 197 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 MLC1Q15049 377 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 OPN5Q6U736 354 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 TMEM107Q6UX40 140 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 RNF111Q6ZNA4 994 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 ANKRD46Q86W74 232 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 CLECL1Q8IZS7 167 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 ZNF721Q8TF20 911 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 SMPDL3BQ92485 455 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 OR52E6Q96RD3 313 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.59■□□□□ 0.41
LIMD2-209ENST00000580222 TMEM45AQ9NWC5 275 aa17.59■□□□□ 0.41
LIMD2-209ENST00000580222 C15orf38-AP3S2A0A0A6YYH1 394 aa17.58■□□□□ 0.4
LIMD2-209ENST00000580222 SH3D21A4FU49 640 aa17.58■□□□□ 0.4
LIMD2-209ENST00000580222 HRKO00198 91 aa17.58■□□□□ 0.4
LIMD2-209ENST00000580222 CNOT4O95628 575 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms