RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 MCOLN1Q9GZU1 580 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 SP140LQ9H930 580 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 CLDND1Q9NY35 253 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 MUTYHQ9UIF7 546 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 MSRAQ9UJ68 235 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 SCML1Q9UN30 329 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 SYNDIG1LA6NDD5 238 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 CT62P0C5K7 136 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 LIMS3P0CW19 117 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 LIMS4P0CW20 117 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 CPEP16870 476 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 NT5EP21589 574 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 AZGP1P25311 298 aaKnown RBP16.36■□□□□ 0.21
ERBB2-205ENST00000578199 RFX3P48380 749 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 ZNF136P52737 540 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 RAB40BQ12829 278 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 DECR1Q16698 335 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 ZNF628Q5EBL2 1059 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 HSDL2Q6YN16 418 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 USP53Q70EK8 1073 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 ASB15Q8WXK1 588 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 ASB12Q8WXK4 309 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 SAMD8Q96LT4 415 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 ENKD1Q9H0I2 346 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 HRASLS2Q9NWW9 162 aa16.36■□□□□ 0.21
ERBB2-205ENST00000578199 AGRPO00253 132 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 SURF4O15260 269 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 MSL3P1P0C860 447 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 ZNF24P17028 368 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 IFNA8P32881 189 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 CDH11P55287 796 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 CAV3P56539 151 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.35■□□□□ 0.21
ERBB2-205ENST00000578199 CDC20Q12834 499 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 WDR88Q6ZMY6 472 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 NCCRP1Q6ZVX7 275 aaPredicted RBP16.35■□□□□ 0.21
ERBB2-205ENST00000578199 MRGPREQ86SM8 312 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 OR8H2Q8N162 312 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 CAMKVQ8NCB2 501 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 NTMQ9P121 344 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 A0A075B6Q4 140 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 HTR2AP28223 471 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 EEF1A1P68104 462 aaKnown RBP16.35■□□□□ 0.21
ERBB2-205ENST00000578199 C1orf61Q13536 156 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 LARS2Q15031 903 aaKnown RBP16.35■□□□□ 0.21
ERBB2-205ENST00000578199 DEFB110Q30KQ9 67 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 MINDY4Q4G0A6 757 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 C3orf38Q5JPI3 329 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 MBOAT2Q6ZWT7 520 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 ABHD13Q7L211 337 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 LAPTM4BQ86VI4 370 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 POGLUT1Q8NBL1 392 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 PFN4Q8NHR9 129 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 RERGQ96A58 199 aaPredicted RBP16.35■□□□□ 0.21
ERBB2-205ENST00000578199 DPH1Q9BZG8 443 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 FBRSQ9HAH7 460 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 ATP13A2Q9NQ11 1180 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 IL20Q9NYY1 176 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 CRNNQ9UBG3 495 aaPredicted RBP16.35■□□□□ 0.21
ERBB2-205ENST00000578199 CPNE7Q9UBL6 633 aa16.35■□□□□ 0.21
ERBB2-205ENST00000578199 LINC00854A0A1B0GVQ3 168 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 ZC3H12DA2A288 527 aaKnown RBP16.34■□□□□ 0.21
ERBB2-205ENST00000578199 ATXN8OSP0DMR3 200 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 TYRP1P17643 537 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 GABRG2P18507 467 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 FPR3P25089 353 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 SDC2P34741 201 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 ETV6P41212 452 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 ILF3Q12906 894 aaKnown RBP eCLIP16.34■□□□□ 0.21
ERBB2-205ENST00000578199 INSL4Q14641 139 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 FHL5Q5TD97 284 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 CCBE1Q6UXH8 406 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-205ENST00000578199 GDPGP1Q6ZNW5 385 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 DGAT2L6Q6ZPD8 337 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 DCLRE1CQ96SD1 692 aaKnown RBP16.34■□□□□ 0.21
ERBB2-205ENST00000578199 RBCK1Q9BYM8 510 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 CPNE5Q9HCH3 593 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 FGF20Q9NP95 211 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-205ENST00000578199 C20orf141Q9NUB4 165 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 SPTBP11277 2137 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 URADA6NGE7 173 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 KDM4EB2RXH2 506 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-205ENST00000578199 SGK494L7N484 410 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 SOCS6O14544 535 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 VSX2P58304 361 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-205ENST00000578199 HNRNPA0Q13151 305 aaKnown RBP16.34■□□□□ 0.21
ERBB2-205ENST00000578199 CRTC2Q53ET0 693 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-205ENST00000578199 DCST2Q5T1A1 773 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 MRPL2Q5T653 305 aaKnown RBP16.34■□□□□ 0.21
ERBB2-205ENST00000578199 CELF2-AS1Q8N7Q2 184 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 NACC2Q96BF6 587 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 RIPOR3Q96MK2 946 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 PRSS27Q9BQR3 290 aa16.34■□□□□ 0.21
ERBB2-205ENST00000578199 C19orf53Q9UNZ5 99 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-205ENST00000578199 KLF4O43474 513 aa16.33■□□□□ 0.2
ERBB2-205ENST00000578199 TPTEP56180 551 aa16.33■□□□□ 0.2
ERBB2-205ENST00000578199 SLC35F1Q5T1Q4 408 aa16.33■□□□□ 0.2
ERBB2-205ENST00000578199 AADACL4Q5VUY2 407 aa16.33■□□□□ 0.2
ERBB2-205ENST00000578199 SMARCD3Q6STE5 483 aa16.33■□□□□ 0.2
ERBB2-205ENST00000578199 ZNF620Q6ZNG0 422 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms