RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 DPEP2Q9H4A9 486 aa13.78□□□□□ -0.2
CUEDC1-206ENST00000577830 RBFOX1Q9NWB1 397 aaKnown RBP13.78□□□□□ -0.2
CUEDC1-206ENST00000577830 EXOSC1Q9Y3B2 195 aaKnown RBP13.78□□□□□ -0.2
CUEDC1-206ENST00000577830 AP1M2Q9Y6Q5 423 aa13.78□□□□□ -0.2
CUEDC1-206ENST00000577830 A0A1W2PP55 124 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 LRIT2A6NDA9 550 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 LRRC72A6NJI9 287 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 A8MVJ9 347 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 SCO1O75880 301 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 PRG2P13727 222 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 BMP7P18075 431 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 GSTM3P21266 225 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 ITGB7P26010 798 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 CDK3Q00526 305 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 FUT5Q11128 374 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 DEFB134Q4QY38 66 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 CEACAM19Q7Z692 300 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 NRSN1Q8IZ57 195 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 RFKQ969G6 155 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 TRIM63Q969Q1 353 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 ATF6BQ99941 703 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 PPIL3Q9H2H8 161 aaKnown RBP13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 TESQ9UGI8 421 aaKnown RBP13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 DPP7Q9UHL4 492 aa13.77□□□□□ -0.2
CUEDC1-206ENST00000577830 CDC42EP2O14613 210 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 PAPLNO95428 1278 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 TIMP1P01033 207 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 MYOGP15173 224 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 CDK5Q00535 292 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 FCN2Q15485 313 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 ZNF77Q15935 545 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 C1orf94Q6P1W5 598 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 LILRA6Q6PI73 481 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 RASGRP3Q8IV61 690 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 GCDHQ92947 438 aaPredicted RBP13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 SLC41A3Q96GZ6 507 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 TAS2R7Q9NYW3 318 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 NPAP1Q9NZP6 1156 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 WDR45Q9Y484 360 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 TRAV27A0A087WT01 109 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 CENPVL1A0A0U1RR11 272 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 FABP7O15540 132 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 PYCR1P32322 319 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 MPIP34949 423 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 EPHA5P54756 1037 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 MINDY4Q4G0A6 757 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 TMEM201Q5SNT2 666 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 BHLHB9Q6PI77 547 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 RDH10Q8IZV5 341 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 OR7G1Q8NGA0 311 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 OR4M1Q8NGD0 313 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 PFN4Q8NHR9 129 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 ENKD1Q9H0I2 346 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 SLC6A17Q9H1V8 727 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 C11orf49Q9H6J7 331 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 FBXL4Q9UKA2 621 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 CHST2Q9Y4C5 530 aa13.77□□□□□ -0.21
CUEDC1-206ENST00000577830 SPEGQ15772 3267 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 ADH1CP00326 375 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 HIST1H1TP22492 207 aaPredicted RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 RPS5P46782 204 aaKnown RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 ANXA11P50995 505 aaKnown RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 MAB21L1Q13394 359 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 ADAM15Q13444 863 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 CDC73Q6P1J9 531 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 PEX5LQ8IYB4 626 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 RIPOR3Q96MK2 946 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 ARHGAP9Q9BRR9 750 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 ALG8Q9BVK2 526 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 HCAR1Q9BXC0 346 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 SPRTNQ9H040 489 aaPredicted RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 RSPH9Q9H1X1 276 aaPredicted RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 CCDC86Q9H6F5 360 aaKnown RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 WDR26Q9H7D7 661 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 SIRT4Q9Y6E7 314 aaPredicted RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 E9PI62 339 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 TBXA2RP21731 343 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 GRPRP30550 384 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 ELAVL3Q14576 367 aaKnown RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 NDUFA9Q16795 377 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 HNRNPA1L2Q32P51 320 aaKnown RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 LRRC17Q8N6Y2 441 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 ZNF433Q8N7K0 673 aaPredicted RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 RSPRY1Q96DX4 576 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 WDR34Q96EX3 536 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 MSLNLQ96KJ4 702 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 RBCK1Q9BYM8 510 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 SLC28A3Q9HAS3 691 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 NCKAP1Q9Y2A7 1128 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 ARRDC5A6NEK1 342 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 CENPBD1B2RD01 187 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 NOS1APO75052 506 aaPredicted RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 NAA10P41227 235 aaPredicted RBP13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 EVX1P49640 407 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 ZNF628Q5EBL2 1059 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 ANKRD54Q6NXT1 300 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 ARL14Q8N4G2 192 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 HDDC3Q8N4P3 179 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 OR2T33Q8NG76 320 aa13.76□□□□□ -0.21
CUEDC1-206ENST00000577830 OR52L1Q8NGH7 329 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms