RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 HNRNPCL2B2RXH8 293 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 HNRNPCL3B7ZW38 293 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 NPIPB9F8W1W9 429 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 FBP2O00757 339 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 SNPHO15079 494 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 HNRNPCL1O60812 293 aaKnown RBP11.32□□□□□ -0.6
RARA-208ENST00000577646 NME6O75414 186 aaPredicted RBP11.32□□□□□ -0.6
RARA-208ENST00000577646 UNC5CO95185 931 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 IGKV1D-16P01601 117 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 HNRNPCL4P0DMR1 293 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 NR2F1P10589 423 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 COX4I1P13073 169 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 GAS1P54826 345 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 DSTNP60981 165 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 PPIAP62937 165 aaKnown RBP11.32□□□□□ -0.6
RARA-208ENST00000577646 PLGLB1Q02325 96 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 SLC10A1Q14973 349 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 ZNF141Q15928 474 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 GLYR1Q49A26 553 aaPredicted RBP11.32□□□□□ -0.6
RARA-208ENST00000577646 FLYWCH1Q4VC44 716 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 KLHL26Q53HC5 615 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 COLEC12Q5KU26 742 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 TNFAIP8L2Q6P589 184 aaPredicted RBP11.32□□□□□ -0.6
RARA-208ENST00000577646 FIGNL1Q6PIW4 674 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 RETREG3Q86VR2 466 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 SNX32Q86XE0 403 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 PLCZ1Q86YW0 608 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 CLEC4FQ8N1N0 589 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 FAM109AQ8N4B1 249 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 OR5D16Q8NGK9 328 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 OR1J4Q8NGS1 313 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 LRRC58Q96CX6 371 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 SERHL2Q9H4I8 314 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 TMEM38AQ9H6F2 299 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 PTGES2Q9H7Z7 377 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 ZDHHC11Q9H8X9 412 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 BCL2L10Q9HD36 194 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 A4GALTQ9NPC4 353 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 SLC6A13Q9NSD5 602 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 ASF1BQ9NVP2 202 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 TUBA8Q9NY65 449 aaPredicted RBP11.32□□□□□ -0.6
RARA-208ENST00000577646 SLC25A37Q9NYZ2 338 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 VAPAQ9P0L0 249 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.32□□□□□ -0.6
RARA-208ENST00000577646 WDR45Q9Y484 360 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 DTNAQ9Y4J8 743 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 WIF1Q9Y5W5 379 aa11.32□□□□□ -0.6
RARA-208ENST00000577646 LOC100653049A0A140TA62 436 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 LINC01387J3KSC0 135 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 MRASO14807 208 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 TFECO14948 347 aaPredicted RBP11.31□□□□□ -0.6
RARA-208ENST00000577646 NDUFB5O43674 189 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 SUSD5O60279 629 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 HCN1O60741 890 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 TNFRSF21O75509 655 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 KRT34O76011 436 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 OXSR1O95747 527 aaPredicted RBP11.31□□□□□ -0.6
RARA-208ENST00000577646 IGHG3P01860 377 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 TFPTP0C1Z6 253 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 DCTP40126 519 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 PTGDSP41222 190 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 DNASE1L1P49184 302 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 CRISP3P54108 245 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 MLLT10P55197 1068 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 GPR85P60893 370 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 RPS26P62854 115 aaKnown RBP11.31□□□□□ -0.6
RARA-208ENST00000577646 FOXK1P85037 733 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 RBPJQ06330 500 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 SF3A3Q12874 501 aaKnown RBP eCLIP11.31□□□□□ -0.6
RARA-208ENST00000577646 GANABQ14697 944 aaKnown RBP11.31□□□□□ -0.6
RARA-208ENST00000577646 KRT72Q14CN4 511 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 IGFBP7Q16270 282 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 ZNF630Q2M218 657 aaPredicted RBP11.31□□□□□ -0.6
RARA-208ENST00000577646 GRAMD1BQ3KR37 738 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 GPAT3Q53EU6 434 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.31□□□□□ -0.6
RARA-208ENST00000577646 PRAMEF20Q5VT98 475 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 DNAJC14Q6Y2X3 702 aaPredicted RBP11.31□□□□□ -0.6
RARA-208ENST00000577646 SERPINA11Q86U17 422 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 SIAH3Q8IW03 269 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 MSRB3Q8IXL7 192 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 CMIPQ8IY22 773 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 ZNF619Q8N2I2 560 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 ST6GALNAC3Q8NDV1 305 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 TOR1AIP2Q8NFQ8 470 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 OR4C3Q8NH37 302 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 FBXO30Q8TB52 745 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 RAB8BQ92930 207 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 MIB2Q96AX9 1013 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 GPR137Q96N19 417 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 THUMPD3Q9BV44 507 aaKnown RBP11.31□□□□□ -0.6
RARA-208ENST00000577646 TTTY12Q9BZ98 90 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 ARMC7Q9H6L4 198 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 EVA1AQ9H8M9 152 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 CACYBPQ9HB71 228 aaKnown RBP11.31□□□□□ -0.6
RARA-208ENST00000577646 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 NDE1Q9NXR1 346 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 SLAMF8Q9P0V8 285 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 ARMCX1Q9P291 453 aa11.31□□□□□ -0.6
RARA-208ENST00000577646 C15orf41Q9Y2V0 281 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms