RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 AP3M1Q9Y2T2 418 aa13.3□□□□□ -0.28
NPLOC4-218ENST00000574964 GMEB1Q9Y692 573 aa13.3□□□□□ -0.28
NPLOC4-218ENST00000574964 ZFYVE26Q68DK2 2539 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 C2orf72A6NCS6 295 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 H3BNH8 94 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 ACOT7O00154 380 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 NDUFB5O43674 189 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 FCMRO60667 390 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 TNFRSF21O75509 655 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 OXSR1O95747 527 aaPredicted RBP13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 CRYABP02511 175 aaKnown RBP13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 BMP2P12643 396 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 SLC6A2P23975 617 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 PSME3P61289 254 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 PMP22Q01453 160 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 CHRNEQ04844 493 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 FUT5Q11128 374 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 ZNF630Q2M218 657 aaPredicted RBP13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 RABL3Q5HYI8 236 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 TMEM81Q6P7N7 255 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 CISD2Q8N5K1 135 aaKnown RBP13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 Q8NA96 180 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 OR4C3Q8NH37 302 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 SLC38A5Q8WUX1 472 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 TMEM19Q96HH6 336 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 ZNF597Q96LX8 424 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 PIF1Q9H611 641 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 GALNT9Q9HCQ5 603 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 A4GALTQ9NPC4 353 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 DEPPQ9NTK1 212 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 NDE1Q9NXR1 346 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 TUBA8Q9NY65 449 aaPredicted RBP13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 PPP4R1LQ9P1A2 415 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 ITPR1Q14643 2758 aa13.29□□□□□ -0.28
NPLOC4-218ENST00000574964 A0A0G2JMM0 328 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 A0A1W2PPB8 328 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 A0A1W2PRS3 328 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 PRAMEF27A3QJZ7 478 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 CCT8L1PA6NM43 557 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 KIR3DP1A8MWS1 328 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 B2RBV5 119 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 GNB5O14775 395 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 FADS1O60427 444 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 CHRM4P08173 479 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 TFPTP0C1Z6 253 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 ARAFP10398 606 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 TBXA2RP21731 343 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 CALB2P22676 271 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 RFC3P40938 356 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 SLC7A2P52569 658 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 CDK6Q00534 326 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 ALDH6A1Q02252 535 aaKnown RBP13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 SCARB2Q14108 478 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 SOWAHCQ53LP3 525 aaPredicted RBP13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 TYW3Q6IPR3 259 aaKnown RBP13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 C16orf89Q6UX73 402 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 FRRS1Q6ZNA5 592 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 SERPINA11Q86U17 422 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 MARCH3Q86UD3 253 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 IFNEQ86WN2 208 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 C10orf111Q8N326 155 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 METTL25Q8N6Q8 603 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 GATSQ8NAP1 163 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 C11orf65Q8NCR3 313 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 OR1J4Q8NGS1 313 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 NFKBIDQ8NI38 313 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 MAL2Q969L2 176 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 TMEM41AQ96HV5 264 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 SPATA9Q9BWV2 254 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 TMEM38AQ9H6F2 299 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 KAT8Q9H7Z6 458 aaKnown RBP13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 MTHFD2LQ9H903 347 aaPredicted RBP13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 HHATLQ9HCP6 504 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 AGPAT4Q9NRZ5 378 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 B4GALT7Q9UBV7 327 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 ANGPT4Q9Y264 503 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 WIF1Q9Y5W5 379 aa13.28□□□□□ -0.28
NPLOC4-218ENST00000574964 ATMQ13315 3056 aa13.27□□□□□ -0.28
NPLOC4-218ENST00000574964 A0A0G2JPF8 293 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 PINLYPA6NC86 204 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 HNRNPCL2B2RXH8 293 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 HNRNPCL3B7ZW38 293 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 ALG1L2C9J202 215 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 GTPBP1O00178 669 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 TFECO14948 347 aaPredicted RBP13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 KIAA0513O60268 411 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 HNRNPCL1O60812 293 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 SORBS2O94875 1100 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 ANGPTL1O95841 491 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 PRB1P04280 392 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 NGFRP08138 427 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 GUSBP08236 651 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 HNRNPCL4P0DMR1 293 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 ZNF24P17028 368 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 ENDOUP21128 410 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 ELAVL4P26378 380 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 PTGDSP41222 190 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 RBBP4Q09028 425 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 C17orf67Q0P5P2 114 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 TOMM20Q15388 145 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms