RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ATOH1Q92858 354 aaPredicted RBP13.5□□□□□ -0.25
SMG6-215ENST00000574501 UQCC2Q9BRT2 126 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 FAIM2Q9BWQ8 316 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 SLC6A17Q9H1V8 727 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 OR51I1Q9H343 314 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 RRAGCQ9HB90 399 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 PIPOXQ9P0Z9 390 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 A0A0G2JK05 382 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 FAM74A7A6NL05 159 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 LINC01387J3KSC0 135 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 RTCAO00442 366 aaKnown RBP13.49□□□□□ -0.25
SMG6-215ENST00000574501 INPPL1O15357 1258 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 FRS3O43559 492 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 SIX6O95475 246 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 WDPCPO95876 746 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 KCNA10Q16322 511 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 SYTL3Q4VX76 610 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 FAM74A3Q4VXF1 159 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 HACD4Q5VWC8 232 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 OR5M10Q6IEU7 315 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 SLC25A25Q6KCM7 469 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 SEZ6L2Q6UXD5 910 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 CLRN3Q8NCR9 226 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 OR56A3Q8NH54 315 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 PLD4Q96BZ4 506 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 KCTD12Q96CX2 325 aaKnown RBP13.49□□□□□ -0.25
SMG6-215ENST00000574501 ALG14Q96F25 216 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 TMEM169Q96HH4 297 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 PRR23D1E9PI22 279 aaPredicted RBP13.49□□□□□ -0.25
SMG6-215ENST00000574501 E9PI62 339 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 SURF4O15260 269 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 PTP4A3O75365 173 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 LDOC1O95751 146 aaPredicted RBP13.49□□□□□ -0.25
SMG6-215ENST00000574501 IGHA1P01876 353 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 PRR23D2P0DMB1 279 aaPredicted RBP13.49□□□□□ -0.25
SMG6-215ENST00000574501 C4BPBP20851 252 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 GSTM3P21266 225 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 SERPINA4P29622 427 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 MMP15P51511 669 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 RAG2P55895 527 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 CNTN1Q12860 1018 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 HTR4Q13639 388 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 KLF9Q13886 244 aaPredicted RBP13.49□□□□□ -0.25
SMG6-215ENST00000574501 MELKQ14680 651 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 HLXQ14774 488 aaPredicted RBP13.49□□□□□ -0.25
SMG6-215ENST00000574501 SERINC5Q86VE9 423 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 CPXM2Q8N436 756 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 ZNF454Q8N9F8 522 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 PELOQ9BRX2 385 aaKnown RBP13.49□□□□□ -0.25
SMG6-215ENST00000574501 ACTR6Q9GZN1 396 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 QRSL1Q9H0R6 528 aaKnown RBP13.49□□□□□ -0.25
SMG6-215ENST00000574501 IFT22Q9H7X7 185 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 SLC35C2Q9NQQ7 365 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 BABAM2Q9NXR7 383 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 TRPC4Q9UBN4 977 aa13.49□□□□□ -0.25
SMG6-215ENST00000574501 EXOGQ9Y2C4 368 aaKnown RBP13.49□□□□□ -0.25
SMG6-215ENST00000574501 MCRIP1C9JLW8 97 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 LRRN3E7EW58 273 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 AIPO00170 330 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 PGRMC2O15173 223 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 ZNF821O75541 412 aaPredicted RBP13.48□□□□□ -0.25
SMG6-215ENST00000574501 SLCO2B1O94956 709 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 UBL3O95164 117 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 NR2F1P10589 423 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 PDHA2P29803 388 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 PBLDP30039 288 aaPredicted RBP13.48□□□□□ -0.25
SMG6-215ENST00000574501 PTGER1P34995 402 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 GDNFP39905 211 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 RAD52P43351 418 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 RNF144AP50876 292 aaPredicted RBP13.48□□□□□ -0.25
SMG6-215ENST00000574501 TBPL1P62380 186 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 NHLRC1Q6VVB1 395 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 MRGPREQ86SM8 312 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 LRRTM4Q86VH4 590 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 KRT78Q8N1N4 520 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 KLK6Q92876 244 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 ALG8Q9BVK2 526 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 SPATA5L1Q9BVQ7 753 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 LRRN3Q9H3W5 708 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 MED20Q9H944 212 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 TEX10Q9NXF1 929 aaPredicted RBP13.48□□□□□ -0.25
SMG6-215ENST00000574501 MARK1Q9P0L2 795 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 ZNF69Q9UC07 566 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 CCL15-CCL14A0A0B4J2E2 113 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 NPC1O15118 1278 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 ARPC1BO15143 372 aaKnown RBP13.48□□□□□ -0.25
SMG6-215ENST00000574501 ARPC5O15511 151 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 TSPAN6O43657 245 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 SOCS5O75159 536 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 NPPBP16860 134 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 DEFA5Q01523 94 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 CCL15Q16663 113 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 HIST2H2AA3Q6FI13 130 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 CPOQ8IVL8 374 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 OR13C5Q8NGS8 318 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 OR5W2Q8NH69 310 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 YIPF4Q9BSR8 244 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 MED9Q9NWA0 146 aa13.48□□□□□ -0.25
SMG6-215ENST00000574501 H2AFY2Q9P0M6 372 aaPredicted RBP13.48□□□□□ -0.25
SMG6-215ENST00000574501 RCE1Q9Y256 329 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms