RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MLF2Q15773 248 aaPredicted RBP14.61□□□□□ -0.07
NUP88-207ENST00000573584 C6orf132Q5T0Z8 1188 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 MRM1Q6IN84 353 aaKnown RBP14.61□□□□□ -0.07
NUP88-207ENST00000573584 SLC48A1Q6P1K1 146 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 MBOAT2Q6ZWT7 520 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 SFTPA1Q8IWL2 248 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 KAT2AQ92830 837 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 IMP3Q9NV31 184 aaKnown RBP14.61□□□□□ -0.07
NUP88-207ENST00000573584 NLGN3Q9NZ94 848 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 IGLON5A6NGN9 336 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 CDC42EP2O14613 210 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 KLF4O43474 513 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 LATO43561 262 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 HRO43593 1189 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 PAICSP22234 425 aaKnown RBP14.61□□□□□ -0.07
NUP88-207ENST00000573584 CERS1P27544 350 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 PRKAR1BP31321 381 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 GCGRP47871 477 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 RAB28P51157 221 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 ATP12AP54707 1039 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 RAB8AP61006 207 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 C19orf57Q0VDD7 668 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 GPR176Q14439 515 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 BICRALQ6AI39 1079 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 CREB3L2Q70SY1 520 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 CXXC5Q7LFL8 322 aaKnown RBP14.61□□□□□ -0.07
NUP88-207ENST00000573584 ACBD7Q8N6N7 88 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 MRPL43Q8N983 215 aaKnown RBP14.61□□□□□ -0.07
NUP88-207ENST00000573584 THAP7Q9BT49 309 aaPredicted RBP14.61□□□□□ -0.07
NUP88-207ENST00000573584 ZDHHC4Q9NPG8 344 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 BABAM2Q9NXR7 383 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 CES1P1Q9UKY3 287 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 SIRT4Q9Y6E7 314 aaPredicted RBP14.61□□□□□ -0.07
NUP88-207ENST00000573584 C12orf71A8MTZ7 269 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 ZIC2O95409 532 aaPredicted RBP14.6□□□□□ -0.07
NUP88-207ENST00000573584 PAHP00439 452 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 SLC6A1P30531 599 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 TALDO1P37837 337 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 MTNR1BP49286 362 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 PDX1P52945 283 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 P2RX3P56373 397 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 ZNF234Q14588 700 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 PLBD1Q6P4A8 553 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 SMARCD3Q6STE5 483 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 LSRQ86X29 649 aaPredicted RBP14.6□□□□□ -0.07
NUP88-207ENST00000573584 DNAJC5GQ8N7S2 189 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 OR5M3Q8NGP4 307 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 CAPNS2Q96L46 248 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 UBL7Q96S82 380 aaPredicted RBP14.6□□□□□ -0.07
NUP88-207ENST00000573584 TBX5Q99593 518 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 MRPS30Q9NP92 439 aaKnown RBP14.6□□□□□ -0.07
NUP88-207ENST00000573584 CYSLTR2Q9NS75 346 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 ACSL5Q9ULC5 683 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 LANCL1O43813 399 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 LINC00271P0C7V0 271 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 F3P13726 295 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 IL20RBQ6UXL0 311 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 ZNF767PQ75MW2 155 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 ETFBKMTQ8IXQ9 262 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 OR4M1Q8NGD0 313 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 UBQLN3Q9H347 655 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 OR1A2Q9Y585 309 aa14.6□□□□□ -0.07
NUP88-207ENST00000573584 J3QRE1 110 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 HBMQ6B0K9 141 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 LRRC28Q86X40 367 aaPredicted RBP14.59□□□□□ -0.07
NUP88-207ENST00000573584 OR2L5Q8NG80 312 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 ADAMTS15Q8TE58 950 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 ZFPM2Q8WW38 1151 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 RFT1Q96AA3 541 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 SLC35A4Q96G79 324 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 HYLS1Q96M11 299 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 ALG8Q9BVK2 526 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 JAM3Q9BX67 310 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 ACTRT3Q9BYD9 372 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 RNF208Q9H0X6 261 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 ABCG5Q9H222 651 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 DEC1Q9P2X7 70 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 SLC7A7Q9UM01 511 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 NUMA1Q14980 2115 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 A0A1B0GVC2 190 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 ZC3H12DA2A288 527 aaKnown RBP14.59□□□□□ -0.07
NUP88-207ENST00000573584 A6NIN4 97 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 OR5F1O95221 314 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 VIPR2P41587 438 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 BDH1Q02338 343 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 KRT33BQ14525 404 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 LTB4RQ15722 352 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 SAMD12Q8N8I0 201 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 ARMC5Q96C12 935 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 PPIL3Q9H2H8 161 aaKnown RBP14.59□□□□□ -0.07
NUP88-207ENST00000573584 MED20Q9H944 212 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 ENAMQ9NRM1 1142 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 TEKT2Q9UIF3 430 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 NCKAP1Q9Y2A7 1128 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 GPSM3Q9Y4H4 160 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 ZNF780BQ9Y6R6 833 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 ITGB8P26012 769 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 SHC1P29353 583 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 OR3A3P47888 321 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 BTG1P62324 171 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms