RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 LAMP1P11279 417 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 CAPN3P20807 821 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 CHMP24386 653 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 DPP4P27487 766 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 GABRA3P34903 492 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 SLC1A6P48664 564 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 RPL14P50914 215 aaKnown RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 AGFG1P52594 562 aaKnown RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 TPD52P55327 224 aaPredicted RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 DSCR4P56555 118 aaPredicted RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 PRR5P85299 388 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 GANABQ14697 944 aaKnown RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 DUSP5Q16690 384 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMG6-212ENST00000573153 BEND6Q5SZJ8 279 aaPredicted RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 CPTPQ5TA50 214 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 ARSKQ6UWY0 536 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 MARCH3Q86UD3 253 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 OR4C3Q8NH37 302 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 FBXO30Q8TB52 745 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 OR5P2Q8WZ92 322 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 FAM120BQ96EK7 910 aaKnown RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 C16orf58Q96GQ5 468 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 PRPF18Q99633 342 aaKnown RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 BHLHE41Q9C0J9 482 aaPredicted RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 CENPHQ9H3R5 247 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 HHATLQ9HCP6 504 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 SDHAF3Q9NRP4 125 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 NOP53Q9NZM5 478 aaKnown RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 CRIM1Q9NZV1 1036 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 MED11Q9P086 117 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 EIF3LQ9Y262 564 aaKnown RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 RPH3AQ9Y2J0 694 aaPredicted RBP15.65■□□□□ 0.1
SMG6-212ENST00000573153 MED12LQ86YW9 2145 aa15.65■□□□□ 0.1
SMG6-212ENST00000573153 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 A0A1W2PRB8 838 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 TNFSF13O75888 250 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 RCBTB2O95199 551 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 IL2RAP01589 272 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 BGNP21810 368 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 CTSSP25774 331 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 SUCLG1P53597 346 aaKnown RBP15.64■□□□□ 0.09
SMG6-212ENST00000573153 DIO3P55073 304 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 CLDN8P56748 225 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 BCL2A1Q16548 175 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 ENPP6Q6UWR7 440 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 GALNT10Q86SR1 603 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 KRTCAP2Q8N6L1 136 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 GPR151Q8TDV0 419 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 NRGNQ92686 78 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 RNASE6Q93091 150 aaKnown RBP15.64■□□□□ 0.09
SMG6-212ENST00000573153 C1GALT1C1Q96EU7 318 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 OTUB1Q96FW1 271 aaPredicted RBP15.64■□□□□ 0.09
SMG6-212ENST00000573153 RMND5BQ96G75 393 aaPredicted RBP15.64■□□□□ 0.09
SMG6-212ENST00000573153 SFXN2Q96NB2 322 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 STACQ99469 402 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 CXorf36Q9H7Y0 433 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 NEUROD4Q9HD90 331 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 KCNK9Q9NPC2 374 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 DUSP22Q9NRW4 184 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 PPP4R1LQ9P1A2 415 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 HIVEP1P15822 2718 aa15.64■□□□□ 0.09
SMG6-212ENST00000573153 ANKRD17O75179 2603 aaKnown RBP15.64■□□□□ 0.09
SMG6-212ENST00000573153 TEP1Q99973 2627 aaKnown RBP15.64■□□□□ 0.09
SMG6-212ENST00000573153 ZNF469Q96JG9 3925 aaPredicted RBP15.63■□□□□ 0.09
SMG6-212ENST00000573153 SPG11Q96JI7 2443 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 ALG1L2C9J202 215 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 DVL2O14641 736 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 CTAG2O75638 210 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 SOX30O94993 753 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 KCNK2O95069 426 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 G6PDP11413 515 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 TCEA1P23193 301 aaKnown RBP15.63■□□□□ 0.09
SMG6-212ENST00000573153 PRIM2P49643 509 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 CLK3P49761 638 aaKnown RBP15.63■□□□□ 0.09
SMG6-212ENST00000573153 WDR4P57081 412 aaKnown RBP15.63■□□□□ 0.09
SMG6-212ENST00000573153 SRYQ05066 204 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 STX3Q13277 289 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 LSM12Q3MHD2 195 aaKnown RBP15.63■□□□□ 0.09
SMG6-212ENST00000573153 GLYR1Q49A26 553 aaPredicted RBP15.63■□□□□ 0.09
SMG6-212ENST00000573153 AAGABQ6PD74 315 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 CDH24Q86UP0 819 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 OR4K17Q8NGC6 315 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 OR5M1Q8NGP8 315 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 SFXN5Q8TD22 340 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 DUSP19Q8WTR2 217 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 WNT2BQ93097 391 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 MOAP1Q96BY2 351 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 TLCD1Q96CP7 247 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 AKTIPQ9H8T0 292 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 SLC24A3Q9HC58 644 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 GPATCH2Q9NW75 528 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 DKKL1Q9UK85 242 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 F8P00451 2351 aa15.63■□□□□ 0.09
SMG6-212ENST00000573153 OR2M5A3KFT3 312 aa15.62■□□□□ 0.09
SMG6-212ENST00000573153 H0Y3Z8 333 aa15.62■□□□□ 0.09
SMG6-212ENST00000573153 LINC01387J3KSC0 135 aa15.62■□□□□ 0.09
SMG6-212ENST00000573153 OXSR1O95747 527 aaPredicted RBP15.62■□□□□ 0.09
SMG6-212ENST00000573153 ANGPTL1O95841 491 aa15.62■□□□□ 0.09
SMG6-212ENST00000573153 TMIGD3P0DMS9 266 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms