RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 MARCH3Q86UD3 253 aa13.97□□□□□ -0.17
TSR1-202ENST00000571806 WDR75Q8IWA0 830 aaKnown RBP13.97□□□□□ -0.17
TSR1-202ENST00000571806 HOMEZQ8IX15 550 aa13.97□□□□□ -0.17
TSR1-202ENST00000571806 OR6K3Q8NGY3 331 aa13.97□□□□□ -0.17
TSR1-202ENST00000571806 CDC26Q8NHZ8 85 aa13.97□□□□□ -0.17
TSR1-202ENST00000571806 GMPPAQ96IJ6 420 aaPredicted RBP13.97□□□□□ -0.17
TSR1-202ENST00000571806 MARK4Q96L34 752 aa13.97□□□□□ -0.17
TSR1-202ENST00000571806 AMDHD1Q96NU7 426 aa13.97□□□□□ -0.17
TSR1-202ENST00000571806 KLHL4Q9C0H6 718 aa13.97□□□□□ -0.17
TSR1-202ENST00000571806 OR10A4Q9H209 315 aa13.97□□□□□ -0.17
TSR1-202ENST00000571806 MID1IP1Q9NPA3 183 aa13.97□□□□□ -0.17
TSR1-202ENST00000571806 RRAGDQ9NQL2 400 aaPredicted RBP13.97□□□□□ -0.17
TSR1-202ENST00000571806 MCTS1Q9ULC4 181 aaKnown RBP13.97□□□□□ -0.17
TSR1-202ENST00000571806 H0YC42 278 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 H7C1Q1 480 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 RSL1D1O76021 490 aaKnown RBP13.96□□□□□ -0.17
TSR1-202ENST00000571806 NGFRP08138 427 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 LCN1P31025 176 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 TPD52P55327 224 aaPredicted RBP13.96□□□□□ -0.17
TSR1-202ENST00000571806 GTF2IRD2BQ6EKJ0 949 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 BEND4Q6ZU67 534 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 SH2D5Q6ZV89 423 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 GTF2IRD2Q86UP8 949 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 STK32CQ86UX6 486 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 C17orf53Q8N3J3 647 aaPredicted RBP13.96□□□□□ -0.17
TSR1-202ENST00000571806 CEP70Q8NHQ1 597 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 ZBTB8AQ96BR9 441 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 PERPQ96FX8 193 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 ZNF764Q96H86 408 aaPredicted RBP13.96□□□□□ -0.17
TSR1-202ENST00000571806 KCNA7Q96RP8 456 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 GSTO2Q9H4Y5 243 aa13.96□□□□□ -0.17
TSR1-202ENST00000571806 C17orf51A8MQB3 221 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 ALG1L2C9J202 215 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 SS18L1O75177 396 aaPredicted RBP13.95□□□□□ -0.18
TSR1-202ENST00000571806 CRCPO75575 148 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 UTS2O95399 124 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 PRPS2P11908 318 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 GCAP28676 217 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 GABRA3P34903 492 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 RFX3P48380 749 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 CTBP2P56545 445 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 PPP2R2BQ00005 443 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 PDSS1Q5T2R2 415 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 NOXRED1Q6NXP6 359 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 ZNF550Q7Z398 422 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 GGNQ86UU5 652 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 MISPQ8IVT2 679 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 CCNYL1Q8N7R7 359 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 CDRT4Q8N9R6 151 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 OR5M1Q8NGP8 315 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 ZFP28Q8NHY6 868 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 ACTRT2Q8TDY3 377 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 ZC3HAV1LQ96H79 300 aaKnown RBP13.95□□□□□ -0.18
TSR1-202ENST00000571806 RTN4RQ9BZR6 473 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 CXorf56Q9H5V9 222 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 FLRT3Q9NZU0 649 aa13.95□□□□□ -0.18
TSR1-202ENST00000571806 NSD1Q96L73 2696 aaPredicted RBP13.94□□□□□ -0.18
TSR1-202ENST00000571806 C7orf72A4D263 438 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 EIF1AYO14602 144 aaKnown RBP13.94□□□□□ -0.18
TSR1-202ENST00000571806 NDUFB5O43674 189 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 AQP8O94778 261 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 SYNGR4O95473 234 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 HSPA4LO95757 839 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 MYL2P10916 166 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 ME2P23368 584 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 PRPH2P23942 346 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 LOXP28300 417 aaPredicted RBP13.94□□□□□ -0.18
TSR1-202ENST00000571806 EIF1AXP47813 144 aaKnown RBP13.94□□□□□ -0.18
TSR1-202ENST00000571806 RAC1P63000 192 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 SLC29A2Q14542 456 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 FAM219BQ5XKK7 198 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 EXOC3L1Q86VI1 746 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 CIARTQ8N365 385 aaPredicted RBP13.94□□□□□ -0.18
TSR1-202ENST00000571806 GTPBP8Q8N3Z3 284 aaPredicted RBP13.94□□□□□ -0.18
TSR1-202ENST00000571806 NOA1Q8NC60 698 aaKnown RBP13.94□□□□□ -0.18
TSR1-202ENST00000571806 OR6Y1Q8NGX8 325 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 PPP1R14CQ8TAE6 165 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 GPR151Q8TDV0 419 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 TMEM171Q8WVE6 324 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 HOXB13Q92826 284 aaPredicted RBP13.94□□□□□ -0.18
TSR1-202ENST00000571806 HS3ST6Q96QI5 342 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 PSMC3IPQ9P2W1 217 aaPredicted RBP13.94□□□□□ -0.18
TSR1-202ENST00000571806 GPR52Q9Y2T5 361 aa13.94□□□□□ -0.18
TSR1-202ENST00000571806 POLR3HQ9Y535 204 aaPredicted RBP13.94□□□□□ -0.18
TSR1-202ENST00000571806 RAI1Q7Z5J4 1906 aaPredicted RBP13.94□□□□□ -0.18
TSR1-202ENST00000571806 NPIPB8E9PQR5 432 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 GOLGA8RI6L899 631 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 UBFD1O14562 309 aaKnown RBP13.93□□□□□ -0.18
TSR1-202ENST00000571806 ADAMDEC1O15204 470 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 RIPK2O43353 540 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 GLRA3O75311 464 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 SEC22BO75396 215 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 NKX2-2O95096 273 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 PABPC4LP0CB38 370 aaKnown RBP13.93□□□□□ -0.18
TSR1-202ENST00000571806 UROSP10746 265 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 PYGBP11216 843 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 HPGDP15428 266 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 DDX5P17844 614 aaKnown RBP13.93□□□□□ -0.18
TSR1-202ENST00000571806 GPC1P35052 558 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 MAP3K8P41279 467 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms