RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 FAM90A13PP0C7W8 464 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 FAM90A24PP0C7X0 464 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 RRASP10301 218 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PSKH1P11801 424 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ACP5P13686 325 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PPP3CBP16298 524 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ZNF28P17035 718 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CR2P20023 1033 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TAC1P20366 129 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 BGNP21810 368 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CA4P22748 312 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ACKR3P25106 362 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ELAVL4P26378 380 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 MAOBP27338 520 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 DPP4P27487 766 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CD6P30203 668 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 FCGR2BP31994 310 aaPredicted RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 GKP32189 559 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CD70P32970 193 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CA5AP35218 305 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 MAS1LP35410 378 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 AVPR1AP37288 418 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ETV4P43268 484 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 LIMS1P48059 325 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PXNP49023 591 aaPredicted RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 ARRB1P49407 418 aaPredicted RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 STK19P49842 368 aaPredicted RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 PPT1P50897 306 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 P2RY4P51582 365 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 RIDAP52758 137 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 GEMP55040 296 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 F2RL1P55085 397 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SLC37A1P57057 533 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ATP6V0D1P61421 351 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SEMG2Q02383 582 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PRKCQQ04759 706 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SLC18A2Q05940 514 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 FOXM1Q08050 763 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 IL10RBQ08334 325 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ACSM2AQ08AH3 577 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 DUSP8Q13202 625 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 MRPL49Q13405 166 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 PRPSAP1Q14558 356 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 DLG2Q15700 870 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 C5orf64Q2M2E5 130 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TMEM44Q2T9K0 475 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 KIF19Q2TAC6 998 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CHRFAM7AQ494W8 412 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 GXYLT1Q4G148 440 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 LBHQ53QV2 105 aaPredicted RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 RUNDC3AQ59EK9 446 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TCEAL5Q5H9L2 206 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SIRPB2Q5JXA9 342 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PRSS36Q5K4E3 855 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SPANXN3Q5MJ09 141 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PPM1LQ5SGD2 360 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TEDDM1Q5T9Z0 273 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 MROH9Q5TGP6 573 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PRAMEF7Q5VXH5 474 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 LIPJQ5W064 366 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ACSM2BQ68CK6 577 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 FCRL6Q6DN72 434 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 DHRS7BQ6IAN0 325 aaPredicted RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 OR5M10Q6IEU7 315 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 FBXO42Q6P3S6 717 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PODNL1Q6PEZ8 512 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PRSS57Q6UWY2 283 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 USP30Q70CQ3 517 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 PGAP1Q75T13 922 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 C16orf62Q7Z3J2 963 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 P4HA3Q7Z4N8 544 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TECPR1Q7Z6L1 1165 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TMEM135Q86UB9 458 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 KCNMB4Q86W47 210 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 HORMAD1Q86X24 394 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 GLB1L2Q8IW92 636 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.32□□□□□ -1.88
SMG6-208ENST00000570874 SLC38A6Q8IZM9 456 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 GCNT2Q8N0V5 402 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ZNF276Q8N554 614 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 FAM89BQ8N5H3 189 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TEX26Q8N6G2 289 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 CDYL2Q8N8U2 506 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 NECAP1Q8NC96 275 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 VN1R2Q8NFZ6 395 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 OR2D3Q8NGH3 330 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 OR4D6Q8NGJ1 314 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 OR13C4Q8NGS5 318 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 OR6K2Q8NGY2 324 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 RHEBL1Q8TAI7 183 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 ITFG1Q8TB96 612 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 BPIFB1Q8TDL5 484 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 GDPD5Q8WTR4 605 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 NAT14Q8WUY8 206 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 HSD17B8Q92506 261 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 NSMAFQ92636 917 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 UTP4Q969X6 686 aaKnown RBP3.32□□□□□ -1.88
SMG6-208ENST00000570874 VOPP1Q96AW1 172 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 TADA1Q96BN2 335 aa3.32□□□□□ -1.88
SMG6-208ENST00000570874 S100PBPQ96BU1 408 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms