RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 CYP20A1Q6UW02 462 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 TREML4Q6UXN2 200 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 C4orf22Q6V702 233 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 CMC1Q7Z7K0 106 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 ISCA2Q86U28 154 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 CCDC25Q86WR0 208 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 MYLK4Q86YV6 388 aaPredicted RBP6.31□□□□□ -1.4
SMG6-205ENST00000570659 SVOPLQ8N434 492 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 NKAPQ8N5F7 415 aaKnown RBP6.31□□□□□ -1.4
SMG6-205ENST00000570659 TEX9Q8N6V9 391 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 ZDHHC22Q8N966 263 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 WDR31Q8NA23 367 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 OR52N5Q8NH56 324 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 OR2W6PQ8NHA6 318 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 OR2V1Q8NHB1 315 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 UHMK1Q8TAS1 419 aaKnown RBP6.31□□□□□ -1.4
SMG6-205ENST00000570659 HSD17B8Q92506 261 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 ANKRD7Q92527 254 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 KISS1RQ969F8 398 aaPredicted RBP6.31□□□□□ -1.4
SMG6-205ENST00000570659 TMCO6Q96DC7 493 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 RNF145Q96MT1 663 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 DDX47Q9H0S4 455 aaKnown RBP6.31□□□□□ -1.4
SMG6-205ENST00000570659 ALG9Q9H6U8 611 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 ZNF696Q9H7X3 374 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 SEC61A2Q9H9S3 476 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 SAYSD1Q9NPB0 183 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 GUCA1BQ9UMX6 200 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 TRAF6Q9Y4K3 522 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 SLC25A15Q9Y619 301 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 AP4B1Q9Y6B7 739 aa6.31□□□□□ -1.4
SMG6-205ENST00000570659 ARHGAP32A7KAX9 2087 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 IGLV3-32A0A0A0MS00 114 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 GOLGA6L10A0A0M3HER8 536 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 ATP6V1G2-DDX39BF2Z307 99 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 PGM3O95394 542 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 TUBBP07437 444 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 ZNF17P17021 662 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 COX5AP20674 150 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 SFTPDP35247 375 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 ARFIP2P53365 341 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 PNLIPRP2P54317 469 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 CDH15P55291 814 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 CHRNEQ04844 493 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 CSTF3Q12996 717 aaKnown RBP6.3□□□□□ -1.4
SMG6-205ENST00000570659 HNRNPA0Q13151 305 aaKnown RBP6.3□□□□□ -1.4
SMG6-205ENST00000570659 BIKQ13323 160 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 ITGADQ13349 1161 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 LAPTM5Q13571 262 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 FGFBP1Q14512 234 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 SLMAPQ14BN4 828 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 TOMM34Q15785 309 aaPredicted RBP6.3□□□□□ -1.4
SMG6-205ENST00000570659 PLPPR5Q32ZL2 321 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 PAGE2BQ5JRK9 111 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 TCHHL1Q5QJ38 904 aaPredicted RBP6.3□□□□□ -1.4
SMG6-205ENST00000570659 SH2D4BQ5SQS7 431 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 SLC22A25Q6T423 547 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 SCIMPQ6UWF3 145 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 LRRC70Q7Z2Q7 622 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 EXOC3L1Q86VI1 746 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 NUDT13Q86X67 352 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 CCDC116Q8IYX3 515 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 ZNF433Q8N7K0 673 aaPredicted RBP6.3□□□□□ -1.4
SMG6-205ENST00000570659 NUP43Q8NFH3 380 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 FAM216AQ8WUB2 273 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 UBTD2Q8WUN7 234 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 OSTF1Q92882 214 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 ZMYND19Q96E35 227 aaPredicted RBP6.3□□□□□ -1.4
SMG6-205ENST00000570659 FBXO17Q96EF6 278 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 UBXN10Q96LJ8 280 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 NSUN5Q96P11 429 aaKnown RBP6.3□□□□□ -1.4
SMG6-205ENST00000570659 SNX18Q96RF0 628 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 LRRC1Q9BTT6 524 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 CAPS2Q9BXY5 557 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 PRRG4Q9BZD6 226 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 STMN4Q9H169 189 aaPredicted RBP6.3□□□□□ -1.4
SMG6-205ENST00000570659 LPAR2Q9HBW0 351 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 KLHL13Q9P2N7 655 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 PRODH2Q9UF12 536 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 TEX264Q9Y6I9 313 aa6.3□□□□□ -1.4
SMG6-205ENST00000570659 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.3□□□□□ -1.4
SMG6-205ENST00000570659 NPIPA5A0A0B4J1W7 369 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 A0A1W2PNR3 127 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 A0A1W2PRB8 838 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 NPIPA7E9PJI5 369 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 H0YIV9 168 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 K7EPI3 171 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 M0R1B8 84 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 RAD51DO75771 328 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 TTC4O95801 387 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 ANGPTL1O95841 491 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 ALDOAP04075 364 aaKnown RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 NPIPA8P0DM63 369 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 FCGR2AP12318 317 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 HNF1AP20823 631 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 PTX3P26022 381 aaPredicted RBP6.29□□□□□ -1.4
SMG6-205ENST00000570659 IL12BP29460 328 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 OR3A2P47893 321 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 RFX3P48380 749 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 PDLIM4P50479 330 aa6.29□□□□□ -1.4
SMG6-205ENST00000570659 EEFSECP57772 596 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms