RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 GMFGO60234 142 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 TRIM13O60858 407 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 SPAG7O75391 227 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 SEC22BO75396 215 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 ERLIN1O75477 346 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 CGAP01215 116 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 CHRNGP07510 517 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 UROSP10746 265 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 DNASE1P24855 282 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 NTSP30990 170 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 GABRA3P34903 492 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 GCKP35557 465 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 FRKP42685 505 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 SLC6A8P48029 635 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 RFX3P48380 749 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 PSPHP78330 225 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 MRPS22P82650 360 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 HSPB3Q12988 150 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 PDE7AQ13946 482 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 BCL2A1Q16548 175 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 UGT3A2Q3SY77 523 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 EXOSC6Q5RKV6 272 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 RAET1LQ5VY80 246 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 CROCCP2Q86T23 111 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 GGNQ86UU5 652 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 HOMEZQ8IX15 550 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 WFDC11Q8NEX6 87 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 GOT1L1Q8NHS2 421 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 FNDC9Q8TBE3 224 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 LRRC46Q96FV0 321 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 TSSK3Q96PN8 268 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 ALPK1Q96QP1 1244 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 OPN3Q9H1Y3 402 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 LRTM1Q9HBL6 345 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 C1orf109Q9NX04 203 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 ABCG2Q9UNQ0 655 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 FIS1Q9Y3D6 152 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 TLN2Q9Y4G6 2542 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 DSCAMO60469 2012 aa12.47□□□□□ -0.41
GTF3C1-211ENST00000569653 SLC22A20A6NK97 555 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 DEFB108AA8MXU0 73 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 AZIN1O14977 448 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 LSM1O15116 133 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 SEC14L5O43304 696 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 AQP8O94778 261 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 SLITRK5O94991 958 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 NKX2-2O95096 273 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 RAF1P04049 648 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 IFI6P09912 130 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 LINC00032P0C843 101 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 H2AFXP16104 143 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 HOXB4P17483 251 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 CD53P19397 219 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 LOXP28300 417 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 CPOXP36551 454 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 CPA2P48052 419 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 RPL38P63173 70 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 SIRPAP78324 504 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 DECR1Q16698 335 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 KANK2Q63ZY3 851 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 SLC16A11Q8NCK7 471 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 OR4C3Q8NH37 302 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 TCP10LQ8TDR4 215 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 C16orf58Q96GQ5 468 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 ZNF764Q96H86 408 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 MARK4Q96L34 752 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 DACH2Q96NX9 599 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 WFIKKN1Q96NZ8 548 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 CCT7Q99832 543 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 PIGQQ9BRB3 760 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 MECRQ9BV79 373 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 PINK1Q9BXM7 581 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 PIGMQ9H3S5 423 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 RNF122Q9H9V4 155 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 Q9N2J8 555 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 SIRT3Q9NTG7 399 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 C6orf203Q9P0P8 240 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 NTMQ9P121 344 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 SLC17A7Q9P2U7 560 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 WBP11Q9Y2W2 641 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 DNAJC15Q9Y5T4 150 aa12.46□□□□□ -0.41
GTF3C1-211ENST00000569653 FN1P02751 2386 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 H3BML4 177 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 MSTNO14793 375 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 PDPK1O15530 556 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 NPHS1O60500 1241 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 TBX19O60806 448 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 ANGPTL1O95841 491 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 CHEK2O96017 543 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 PEPDP12955 493 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 CREB1P16220 341 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 PSMA4P25789 261 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 ALDH3A1P30838 453 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 PRR5P85299 388 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 DUSP5Q16690 384 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 DEFB113Q30KQ7 82 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 CEP85LQ5SZL2 805 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 RNF165Q6ZSG1 346 aa12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 CXorf67Q86X51 503 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-211ENST00000569653 CNEP1R1Q8N9A8 125 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms