RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 C6orf47O95873 294 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 HTR1EP28566 365 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 GPC1P35052 558 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 MC3RP41968 323 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 CDKN2CP42773 168 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 CORO7P57737 925 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 HBA1P69905 142 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 ZNF155Q12901 538 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-225ENST00000569245 RUNDC3AQ59EK9 446 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 DESI1Q6ICB0 168 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 TMEM211Q6ICI0 200 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 ARPINQ7Z6K5 226 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 SLC44A2Q8IWA5 706 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-225ENST00000569245 MSRB3Q8IXL7 192 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 DEFB107AQ8IZN7 70 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 OR4A15Q8NGL6 344 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 TMBIM1Q969X1 311 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 SARAFQ96BY9 339 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 TMCO6Q96DC7 493 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 ANKRD27Q96NW4 1050 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 COL21A1Q96P44 957 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 GNRHR2Q96P88 292 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 BTBD9Q96Q07 612 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 CADM1Q9BY67 442 aaKnown RBP13.24□□□□□ -0.29
COMMD4-225ENST00000569245 GLIPR2Q9H4G4 154 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 FOLH1BQ9HBA9 442 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 PNPLA3Q9NST1 481 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 DDX18Q9NVP1 670 aaKnown RBP13.24□□□□□ -0.29
COMMD4-225ENST00000569245 SLC25A37Q9NYZ2 338 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 COQ3Q9NZJ6 369 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 VAPAQ9P0L0 249 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 PRPF19Q9UMS4 504 aaKnown RBP13.24□□□□□ -0.29
COMMD4-225ENST00000569245 PCDHB14Q9Y5E9 798 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 HRH3Q9Y5N1 445 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 KLF2Q9Y5W3 355 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-225ENST00000569245 UNC79Q9P2D8 2635 aa13.24□□□□□ -0.29
COMMD4-225ENST00000569245 CRYBG3Q68DQ2 2970 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 A0A087WV62 115 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 C2orf72A6NCS6 295 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 FIGNL2A6NMB9 653 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 GNB5O14775 395 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 TO15178 435 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 UGT2B11O75310 529 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 SLITRK5O94991 958 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 ANP32DO95626 131 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 IFI6P09912 130 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 CT45A8P0DMV1 189 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 CT45A9P0DMV2 189 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 EFNA1P20827 205 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-225ENST00000569245 AGAP20933 346 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 SLC6A2P23975 617 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 IL12BP29460 328 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 HSPB3Q12988 150 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 CT45A2Q5DJT8 189 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 WLSQ5T9L3 541 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 NANOGP8Q6NSW7 305 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 SLC30A6Q6NXT4 461 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 ANGPTL8Q6UXH0 198 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 ZNF551Q7Z340 670 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-225ENST00000569245 ARHGAP24Q8N264 748 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 TRIML2Q8N7C3 387 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 OR8J3Q8NGG0 315 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 CA5BP1Q8WTZ4 195 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 PHF10Q8WUB8 498 aaKnown RBP13.23□□□□□ -0.29
COMMD4-225ENST00000569245 HGDQ93099 445 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 SDCCAG3Q96C92 435 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 VSTM2LQ96N03 204 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 NODALQ96S42 347 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 DMRTA2Q96SC8 542 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 ADOQ96SZ5 270 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 SLC6A15Q9H2J7 730 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 MMADHCQ9H3L0 296 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-225ENST00000569245 NANOGQ9H9S0 305 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 SLC6A13Q9NSD5 602 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 QPCTLQ9NXS2 382 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 TMEM181Q9P2C4 612 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 ABCD2Q9UBJ2 740 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 CELSR2Q9HCU4 2923 aa13.23□□□□□ -0.29
COMMD4-225ENST00000569245 OR6C70A6NIJ9 312 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 ABCB7O75027 752 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 ICOSLGO75144 302 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 CLDN14O95500 239 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 GSNP06396 782 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 UQCRC2P22695 453 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 ACVR2AP27037 513 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 GRNP28799 593 aaKnown RBP13.22□□□□□ -0.29
COMMD4-225ENST00000569245 PSPHP78330 225 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 PMPCAQ10713 525 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 CAPRIN1Q14444 709 aaKnown RBP13.22□□□□□ -0.29
COMMD4-225ENST00000569245 ZNHIT3Q15649 155 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-225ENST00000569245 GTDC1Q4AE62 458 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 EMC4Q5J8M3 183 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 TIGD3Q6B0B8 471 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 DNAJC14Q6Y2X3 702 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-225ENST00000569245 ZNF621Q6ZSS3 439 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 SLC15A3Q8IY34 581 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 OR1J4Q8NGS1 313 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 NEIL3Q8TAT5 605 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 ZFP90Q8TF47 636 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 RND1Q92730 232 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms