RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 TRIM2Q9C040 744 aa11.11□□□□□ -0.63
SNX29-207ENST00000568949 SHARPINQ9H0F6 387 aa11.11□□□□□ -0.63
SNX29-207ENST00000568949 FAIMQ9NVQ4 179 aa11.11□□□□□ -0.63
SNX29-207ENST00000568949 FBXO34Q9NWN3 711 aa11.11□□□□□ -0.63
SNX29-207ENST00000568949 FLRT3Q9NZU0 649 aa11.11□□□□□ -0.63
SNX29-207ENST00000568949 CPSF2Q9P2I0 782 aaKnown RBP11.11□□□□□ -0.63
SNX29-207ENST00000568949 XPR1Q9UBH6 696 aa11.11□□□□□ -0.63
SNX29-207ENST00000568949 MRTO4Q9UKD2 239 aaKnown RBP11.11□□□□□ -0.63
SNX29-207ENST00000568949 SNX24Q9Y343 169 aa11.11□□□□□ -0.63
SNX29-207ENST00000568949 MALRD1Q5VYJ5 2156 aa11.11□□□□□ -0.63
SNX29-207ENST00000568949 FAM234BA2RU67 622 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 ELOA3DA6NLF2 546 aaPredicted RBP11.1□□□□□ -0.63
SNX29-207ENST00000568949 CXCL13O43927 109 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 COQ9O75208 318 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 KLHL2O95198 593 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 ESRRBO95718 433 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 PYGBP11216 843 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 BSPH1Q075Z2 132 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 NAB1Q13506 487 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 DECR1Q16698 335 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 ELOA3BQ3SY89 546 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 SFRP5Q5T4F7 317 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 CYB5R2Q6BCY4 276 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 MFSD12Q6NUT3 480 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 CLEC2AQ6UVW9 174 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 ESPNLQ6ZVH7 1005 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 GALNT10Q86SR1 603 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 MARCH3Q86UD3 253 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 FAM9CQ8IZT9 166 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 C1orf52Q8N6N3 182 aaKnown RBP11.1□□□□□ -0.63
SNX29-207ENST00000568949 PTGR2Q8N8N7 351 aaPredicted RBP11.1□□□□□ -0.63
SNX29-207ENST00000568949 ELOA3Q8NG57 546 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 OR7G2Q8NG99 324 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 OR2V1Q8NHB1 315 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 SELENOMQ8WWX9 145 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 ROBO4Q8WZ75 1007 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 KISS1RQ969F8 398 aaPredicted RBP11.1□□□□□ -0.63
SNX29-207ENST00000568949 ADAD1Q96M93 576 aaKnown RBP11.1□□□□□ -0.63
SNX29-207ENST00000568949 GPR78Q96P69 363 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 SHCBP1LQ9BZQ2 653 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 C12orf49Q9H741 205 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 HHATLQ9HCP6 504 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 GIMAP4Q9NUV9 329 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 CISD1Q9NZ45 108 aaKnown RBP11.1□□□□□ -0.63
SNX29-207ENST00000568949 MCM8Q9UJA3 840 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 B3GALT5Q9Y2C3 310 aa11.1□□□□□ -0.63
SNX29-207ENST00000568949 A0A087WZY1 265 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 C7orf72A4D263 438 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 DPRXA6NFQ7 191 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 SHISA8B8ZZ34 492 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 STX16-NPEPL1H3BU86 382 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 STX16O14662 325 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 IL33O95760 270 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 PDYNP01213 254 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 PABPC4LP0CB38 370 aaKnown RBP11.09□□□□□ -0.63
SNX29-207ENST00000568949 SLC25A16P16260 332 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 CASQ1P31415 396 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 MPIP34949 423 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 NUDT6P53370 316 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 PSMD4P55036 377 aaKnown RBP11.09□□□□□ -0.63
SNX29-207ENST00000568949 RAC1P63000 192 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 PRR5P85299 388 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 ZNF155Q12901 538 aaPredicted RBP11.09□□□□□ -0.63
SNX29-207ENST00000568949 P2RY6Q15077 328 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 TSC22D1Q15714 1073 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 SH2D4BQ5SQS7 431 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 PDSS1Q5T2R2 415 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 AGAP6Q5VW22 663 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 SEZ6L2Q6UXD5 910 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 TFAP2EQ6VUC0 442 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 GTPBP8Q8N3Z3 284 aaPredicted RBP11.09□□□□□ -0.63
SNX29-207ENST00000568949 OR4F6Q8NGB9 312 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 EXOSC8Q96B26 276 aaKnown RBP11.09□□□□□ -0.63
SNX29-207ENST00000568949 HBEGFQ99075 208 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 POTEKPQ9BYX7 375 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 TBL1XR1Q9BZK7 514 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 Q9N2J8 555 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 SLC35C2Q9NQQ7 365 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 FARSBQ9NSD9 589 aaKnown RBP11.09□□□□□ -0.63
SNX29-207ENST00000568949 SENP1Q9P0U3 644 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 PCTPQ9UKL6 214 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 TMCO1Q9UM00 188 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 SNX6Q9UNH7 406 aa11.09□□□□□ -0.63
SNX29-207ENST00000568949 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
SNX29-207ENST00000568949 A0A087WV62 115 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 A0A096LPK6 155 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 KIF2AO00139 706 aaPredicted RBP11.08□□□□□ -0.64
SNX29-207ENST00000568949 WIPF1O43516 503 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 SLITRK5O94991 958 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 ANGPTL1O95841 491 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 IL3P08700 152 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 SRD5A1P18405 259 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 STX2P32856 288 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 ETF1P62495 437 aaKnown RBP11.08□□□□□ -0.64
SNX29-207ENST00000568949 CALCOCO2Q13137 446 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 ITGADQ13349 1161 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 TECRLQ5HYJ1 363 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 TMEM201Q5SNT2 666 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 HBMQ6B0K9 141 aa11.08□□□□□ -0.64
SNX29-207ENST00000568949 SSX8Q7RTT4 187 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms