RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 HMOX2P30519 316 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 RAE1P78406 368 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 ZNF763Q0D2J5 394 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 VEZF1Q14119 521 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 PDSS1Q5T2R2 415 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 OR2L13Q8N349 312 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 OR5M1Q8NGP8 315 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 METTL6Q8TCB7 284 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 NANOS1Q8WY41 292 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 AKAP1Q92667 903 aaKnown RBP eCLIP14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 ZBTB8AQ96BR9 441 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 LMF2Q9BU23 707 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 ACPTQ9BZG2 426 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 TSPYL1Q9H0U9 437 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 LRTM1Q9HBL6 345 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 MIEF1Q9NQG6 463 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 DDX18Q9NVP1 670 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 LAMP3Q9UQV4 416 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 CHD3Q12873 2000 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 RTTNQ86VV8 2226 aa14.1□□□□□ -0.15
HERPUD1-215ENST00000568676 SERTM1A2A2V5 107 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 C7orf72A4D263 438 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 OVOL3O00110 214 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 ADAMDEC1O15204 470 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 NME6O75414 186 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 SUPT7LO94864 414 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 ANGPTL1O95841 491 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 ENO1P06733 434 aaKnown RBP14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 FESP07332 822 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 TUBBP07437 444 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 ANXA4P09525 319 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 CTAGE8P0CG41 777 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 TSPAN8P19075 237 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 NTSP30990 170 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 NCBP2P52298 156 aaKnown RBP eCLIP14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 RAC1P63000 192 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 TRADDQ15628 312 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 HMBOX1Q6NT76 420 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 PPP4R4Q6NUP7 873 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 DNAJC14Q6Y2X3 702 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 GPRIN3Q6ZVF9 776 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 ESPNLQ6ZVH7 1005 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 RPS27LQ71UM5 84 aaKnown RBP14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 MARCH3Q86UD3 253 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 LCA5Q86VQ0 697 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 WFDC8Q8IUA0 241 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 CTAGE4Q8IX94 777 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 OR10D3Q8NH80 312 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 FBXW5Q969U6 566 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 GTPBP3Q969Y2 492 aaKnown RBP14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 REG4Q9BYZ8 158 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 ESRP2Q9H6T0 727 aaKnown RBP14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 ZNF180Q9UJW8 692 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 RNF115Q9Y4L5 304 aa14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 FBN1P35555 2871 aaKnown RBP14.09□□□□□ -0.15
HERPUD1-215ENST00000568676 HEATR5AQ86XA9 2040 aa14.08□□□□□ -0.15
HERPUD1-215ENST00000568676 RNF212BA8MTL3 300 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 RNF223E7ERA6 249 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 UPK1AO00322 258 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 UTS2O95399 124 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 PLAUP00749 431 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 NGFRP08138 427 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 ME2P23368 584 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 SLC6A8P48029 635 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 VPS26BQ4G0F5 336 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 ZNF678Q5SXM1 525 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 LGSNQ5TDP6 509 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 HIPK1Q86Z02 1210 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 GTPBP8Q8N3Z3 284 aaPredicted RBP14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 TMEM151AQ8N4L1 468 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 ACTRT2Q8TDY3 377 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 TMEM158Q8WZ71 300 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 APIPQ96GX9 242 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 ADGRG7Q96K78 797 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 PAFAH2Q99487 392 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 RTN4RQ9BZR6 473 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 ZDHHC18Q9NUE0 388 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 NINJ2Q9NZG7 142 aa14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 DMGDHQ9UI17 866 aaKnown RBP14.08□□□□□ -0.16
HERPUD1-215ENST00000568676 ALG1L2C9J202 215 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 CD5LO43866 347 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 JUNP05412 331 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 SBK3P0C264 359 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 CHN1P15882 459 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 LCN1P31025 176 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 PKNOX1P55347 436 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 C2orf80Q0P641 193 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 CTU2Q2VPK5 515 aaKnown RBP14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 TCHHL1Q5QJ38 904 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 TMEM107Q6UX40 140 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 SSX8Q7RTT4 187 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 ZNF572Q7Z3I7 529 aaPredicted RBP14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 MISPQ8IVT2 679 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 MMGT1Q8N4V1 131 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 OR2V1Q8NHB1 315 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 FAM76AQ8TAV0 307 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 HSD17B8Q92506 261 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 ELP4Q96EB1 424 aa14.07□□□□□ -0.16
HERPUD1-215ENST00000568676 GRIP2Q9C0E4 1043 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms