RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 ZNF556Q9HAH1 456 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 SMURF2Q9HAU4 748 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 MYNNQ9NPC7 610 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 THSD1Q9NS62 852 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 KRT84Q9NSB2 600 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PLCXD1Q9NUJ7 323 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PDP1Q9P0J1 537 aaPredicted RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 STOX2Q9P2F5 926 aaPredicted RBP4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ITGB1BP2Q9UKP3 347 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 FZD4Q9ULV1 537 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 USP22Q9UPT9 525 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 ANGPT4Q9Y264 503 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 POFUT2Q9Y2G5 429 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 SLC27A6Q9Y2P4 619 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 PIEZO2Q9H5I5 2752 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 NOTCH4Q99466 2003 aa4.96□□□□□ -1.62
CAPN3-217ENST00000567817 GNG14A0A1W2PPG7 69 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 C1orf226A1L170 272 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ISPDA4D126 451 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 MYO1GB0I1T2 1018 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 E7EQ34 232 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 E9PQ18 207 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 M0R3G1 203 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 HOXC11O43248 304 aaPredicted RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 FRS3O43559 492 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 TSPAN6O43657 245 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 PCDH7O60245 1069 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 BCAS1O75363 584 aaPredicted RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 PRB1P04280 392 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 IL6RP08887 468 aaPredicted RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ANXA4P09525 319 aaPredicted RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 IL7RP16871 459 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ZNF182P17025 639 aaPredicted RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 MATN1P21941 496 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 PCMT1P22061 227 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 IDSP22304 550 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 KELP23276 732 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 IMPA1P29218 277 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 CA5AP35218 305 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 UGT2B10P36537 528 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 MMP12P39900 470 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 STT3AP46977 705 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 STK19P49842 368 aaPredicted RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 BMXP51813 675 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ARFIP1P53367 373 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 SMIM11AP58511 58 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 NPRL3Q12980 569 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 SLC13A2Q13183 592 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 NAE1Q13564 534 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 RAB32Q13637 225 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 PDE7AQ13946 482 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ELAVL3Q14576 367 aaKnown RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 MAD2L1BPQ15013 274 aaPredicted RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 MLC1Q15049 377 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 RGNQ15493 299 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 NPTX1Q15818 432 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 MEP1AQ16819 746 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 GTDC1Q4AE62 458 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 UBE2UQ5VVX9 321 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 FCRLBQ6BAA4 426 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 NIPAL1Q6NVV3 410 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 LCTLQ6UWM7 567 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 MBOAT1Q6ZNC8 495 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 PAGE2Q7Z2X7 111 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 HSD11B1LQ7Z5J1 315 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ANKRD46Q86W74 232 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 TRIM69Q86WT6 500 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 LINC00471Q8N535 108 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 SLC15A4Q8N697 577 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 FAM86B1Q8N7N1 296 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ZNF540Q8NDQ6 660 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 BPIFB6Q8NFQ5 453 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 TSTD1Q8NFU3 115 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 TTLQ8NG68 377 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 OR7G3Q8NG95 312 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 OR9A1PQ8NGU1 263 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 CLHC1Q8NHS4 586 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 HUS1BQ8NHY5 278 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ZFP90Q8TF47 636 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 SLC5A11Q8WWX8 675 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 PIGKQ92643 395 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 NXPE2Q96DL1 559 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 DTD2Q96FN9 168 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 MED8Q96G25 268 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 Q96MT0 163 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 PKP4Q99569 1192 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 MAPKAP1Q9BPZ7 522 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 RIOK2Q9BVS4 552 aaKnown RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 FUNDC2Q9BWH2 189 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ITPAQ9BY32 194 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 CCDC90BQ9GZT6 254 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ABCG8Q9H221 673 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 CHST8Q9H2A9 424 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 RIBC2Q9H4K1 309 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 NT5DC2Q9H857 520 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 LIN28AQ9H9Z2 209 aaKnown RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 PREBQ9HCU5 417 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 CCDC177Q9NQR7 707 aaPredicted RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 FBXO8Q9NRD0 319 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms