RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 MRPL2Q5T653 305 aaKnown RBP16.34■□□□□ 0.21
HERC2-208ENST00000566635 OR4C15Q8NGM1 316 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 LPAR4Q99677 370 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 OSBPL10Q9BXB5 764 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 SPRY4Q9C004 299 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 SEMA4CQ9C0C4 833 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 GABARAPL1Q9H0R8 117 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 FLRT3Q9NZU0 649 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 PDP1Q9P0J1 537 aaPredicted RBP16.34■□□□□ 0.21
HERC2-208ENST00000566635 KCND3Q9UK17 655 aa16.34■□□□□ 0.21
HERC2-208ENST00000566635 H0YJX3 145 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 TPST2O60704 377 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 CYC1P08574 325 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 CDK4P11802 303 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 DRD5P21918 477 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 NR0B1P51843 470 aaKnown RBP16.33■□□□□ 0.21
HERC2-208ENST00000566635 RPS18P62269 152 aaKnown RBP16.33■□□□□ 0.21
HERC2-208ENST00000566635 PIN1Q13526 163 aaPredicted RBP16.33■□□□□ 0.21
HERC2-208ENST00000566635 HLA-DQA1Q5Y7H0 255 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 OR2Y1Q8NGV0 311 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 CT55Q8WUE5 264 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 G6PC3Q9BUM1 346 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 C8orf4Q9NR00 106 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 ACER3Q9NUN7 267 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 PADI1Q9ULC6 663 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 A4GNTQ9UNA3 340 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 ZNF232Q9UNY5 417 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 NTNG1Q9Y2I2 539 aa16.33■□□□□ 0.21
HERC2-208ENST00000566635 GVINP1Q7Z2Y8 2422 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 OR6C76A6NM76 312 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 SNAP29O95721 258 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 GUSBP08236 651 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 HSPA13P48723 471 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 DECR1Q16698 335 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 ZNF441Q8N8Z8 693 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 ARSGQ96EG1 525 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 KLHL28Q9NXS3 571 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 SMPD3Q9NY59 655 aaPredicted RBP16.33■□□□□ 0.2
HERC2-208ENST00000566635 ACAD8Q9UKU7 415 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 PPIEQ9UNP9 301 aaKnown RBP16.33■□□□□ 0.2
HERC2-208ENST00000566635 LRCH1Q9Y2L9 728 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 PCDHGA10Q9Y5H3 936 aa16.33■□□□□ 0.2
HERC2-208ENST00000566635 NPIPB9F8W1W9 429 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 HS6ST1O60243 411 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 TNFSF15O95150 251 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 GADD45GO95257 159 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 CCNYL3P0C7X3 344 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 FOLR3P41439 243 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 RGS8P57771 180 aaPredicted RBP16.32■□□□□ 0.2
HERC2-208ENST00000566635 SLC26A5P58743 744 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 RNF4P78317 190 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 PCOLCEQ15113 449 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.32■□□□□ 0.2
HERC2-208ENST00000566635 EIPR1Q53HC9 387 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 CMPK2Q5EBM0 449 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 NHSL2Q5HYW2 709 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 RNF220Q5VTB9 566 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 AP1ARQ63HQ0 302 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 DESI1Q6ICB0 168 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 C16orf47Q6ZP98 133 aaPredicted RBP16.32■□□□□ 0.2
HERC2-208ENST00000566635 CYP4Z1Q86W10 505 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 LSRQ86X29 649 aaPredicted RBP16.32■□□□□ 0.2
HERC2-208ENST00000566635 PHF10Q8WUB8 498 aaKnown RBP16.32■□□□□ 0.2
HERC2-208ENST00000566635 RBM4BQ9BQ04 359 aaKnown RBP16.32■□□□□ 0.2
HERC2-208ENST00000566635 RBM4Q9BWF3 364 aaKnown RBP16.32■□□□□ 0.2
HERC2-208ENST00000566635 NMNAT1Q9HAN9 279 aaPredicted RBP16.32■□□□□ 0.2
HERC2-208ENST00000566635 USE1Q9NZ43 259 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 RAB26Q9ULW5 256 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 HS3ST3B1Q9Y662 390 aa16.32■□□□□ 0.2
HERC2-208ENST00000566635 LOC102723996A0A087X1L8 192 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 TRBV11-1A0A0K0K1C0 115 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 CDHR4A6H8M9 788 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 PCDH17O14917 1159 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 HPRP00739 348 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 GKN3PP0CG01 181 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 TCN2P20062 427 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 LIMS1P48059 325 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 ARHGDIAP52565 204 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 DCAF7P61962 342 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 ZIK1Q3SY52 487 aaPredicted RBP16.31■□□□□ 0.2
HERC2-208ENST00000566635 TMEM164Q5U3C3 297 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 HSDL2Q6YN16 418 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 OR4C3Q8NH37 302 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 THAP3Q8WTV1 239 aaPredicted RBP16.31■□□□□ 0.2
HERC2-208ENST00000566635 NRBF2Q96F24 287 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 VMP1Q96GC9 406 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 PRRC1Q96M27 445 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 TMEFF2Q9UIK5 374 aaPredicted RBP16.31■□□□□ 0.2
HERC2-208ENST00000566635 FREM2Q5SZK8 3169 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 CPSF4LA6NMK7 179 aaKnown RBP16.31■□□□□ 0.2
HERC2-208ENST00000566635 IL33O95760 270 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 PRG2P13727 222 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 CSRP1P21291 193 aaKnown RBP16.31■□□□□ 0.2
HERC2-208ENST00000566635 DAPP51397 102 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 PMM1Q92871 262 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 DHRS1Q96LJ7 313 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 ADI1Q9BV57 179 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 OSBPL11Q9BXB4 747 aa16.31■□□□□ 0.2
HERC2-208ENST00000566635 TRBV4-1A0A0J9YWV2 114 aa16.3■□□□□ 0.2
HERC2-208ENST00000566635 RPSAP08865 295 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms