RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 VPS33AQ96AX1 596 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 DTNBP1Q96EV8 351 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 CHMP6Q96FZ7 201 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 SLC35G5Q96KT7 338 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 ZNF317Q96PQ6 595 aaPredicted RBP12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 OR7D2Q96RA2 312 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 PANX1Q96RD7 426 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 DMRTA2Q96SC8 542 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 SLC35A5Q9BS91 424 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 BTBD2Q9BX70 525 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 TMEM120AQ9BXJ8 343 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 SLC6A15Q9H2J7 730 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 ZNF385DQ9H6B1 395 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 PNPLA3Q9NST1 481 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 FBXO34Q9NWN3 711 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 FLRT3Q9NZU0 649 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 WIF1Q9Y5W5 379 aa12.61□□□□□ -0.39
HERPUD1-210ENST00000565966 CCDC154A6NI56 674 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 FIGNL2A6NMB9 653 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 SOX30O94993 753 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 C1QCP02747 245 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 GSNP06396 782 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 NCF2P19878 526 aaPredicted RBP12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 AGAP20933 346 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 ENDOUP21128 410 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 MATN1P21941 496 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 EVI2BP34910 448 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 TRPC1P48995 793 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 CLK3P49761 638 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 GAS1P54826 345 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 RPS26P62854 115 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 SF3A3Q12874 501 aaKnown RBP eCLIP12.6□□□□□ -0.391e-8■■□□□ 12.2
HERPUD1-210ENST00000565966 SQLEQ14534 574 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 CCNJQ5T5M9 372 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 SAXO2Q658L1 398 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 ZNF585AQ6P3V2 769 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 BLOC1S3Q6QNY0 202 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 ZAR1Q86SH2 424 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 PLCZ1Q86YW0 608 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 OR5D16Q8NGK9 328 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 OR5M9Q8NGP3 310 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 MIPOL1Q8TD10 442 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 NEURL3Q96EH8 262 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 SLC52A3Q9NQ40 469 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 SDHAF3Q9NRP4 125 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 SLC6A13Q9NSD5 602 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 CCDC167Q9P0B6 97 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 SPRR3Q9UBC9 169 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 TNFRSF10DQ9UBN6 386 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 ABCG2Q9UNQ0 655 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 TRIM33Q9UPN9 1127 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 PCDHGB3Q9Y5G1 929 aa12.6□□□□□ -0.39
HERPUD1-210ENST00000565966 C15orf38-AP3S2A0A0A6YYH1 394 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 NR5A2O00482 541 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 RFXANKO14593 260 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 SCO2O43819 266 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 WDR1O75083 606 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 HOXD4P09016 255 aaPredicted RBP12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 CD1EP15812 388 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 LCN1P31025 176 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 ARFIP2P53365 341 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 CASP9P55211 416 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 ART3Q13508 389 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 RCAN2Q14206 197 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 GRAMD1BQ3KR37 738 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 AGKQ53H12 422 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 EIPR1Q53HC9 387 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 METTL21CQ5VZV1 264 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 ZNF621Q6ZSS3 439 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 TRIML2Q8N7C3 387 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 FAM83FQ8NEG4 500 aaPredicted RBP12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 GTF2H4Q92759 462 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 ITCHQ96J02 903 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 RTN4RQ9BZR6 473 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 OR51I1Q9H343 314 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 RMND5AQ9H871 391 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 TMEM45AQ9NWC5 275 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 MRPS18CQ9Y3D5 142 aaKnown RBP12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 DOCK7Q96N67 2140 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 NBPF19A0A087WUL8 3843 aa12.59□□□□□ -0.39
HERPUD1-210ENST00000565966 DUXAA6NLW8 204 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 C17orf51A8MQB3 221 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 ZCCHC18P0CG32 403 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 GABRA1P14867 456 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 CAPN3P20807 821 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 ACVR2AP27037 513 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 SRD5A2P31213 254 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 CHI3L1P36222 383 aaPredicted RBP12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 HCFC1P51610 2035 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 CRYZQ08257 329 aaKnown RBP12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 GTDC1Q4AE62 458 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 NHSL2Q5HYW2 709 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 WIPI1Q5MNZ9 446 aaPredicted RBP12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 DCST2Q5T1A1 773 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 VASNQ6EMK4 673 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 OR5M10Q6IEU7 315 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 TNFAIP8L2Q6P589 184 aaPredicted RBP12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 SLC2A7Q6PXP3 512 aa12.58□□□□□ -0.4
HERPUD1-210ENST00000565966 APOOLQ6UXV4 268 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms