RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SLC22A2O15244 555 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 KRT34O76011 436 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 OXSR1O95747 527 aaPredicted RBP14.59□□□□□ -0.07
RAB40C-208ENST00000564703 ANGPTL1O95841 491 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 RFPL3SP0C7P2 107 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 NR2F1P10589 423 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 ABOP16442 354 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 ENDOUP21128 410 aaKnown RBP14.59□□□□□ -0.07
RAB40C-208ENST00000564703 ATP12AP54707 1039 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 STX5Q13190 355 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 UBAP2LQ14157 1087 aaKnown RBP14.59□□□□□ -0.07
RAB40C-208ENST00000564703 PAGE3Q5JUK9 113 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.59□□□□□ -0.07
RAB40C-208ENST00000564703 LRIF1Q5T3J3 769 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 OR5M10Q6IEU7 315 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 MISPQ8IVT2 679 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 ROPN1LQ96C74 230 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 SERHL2Q9H4I8 314 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 ACKR4Q9NPB9 350 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 POLE3Q9NRF9 147 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 SLC6A13Q9NSD5 602 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 FLRT3Q9NZU0 649 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 CORO2BQ9UQ03 480 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 OSGIN2Q9Y236 505 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 C15orf41Q9Y2V0 281 aa14.59□□□□□ -0.07
RAB40C-208ENST00000564703 TRGV5A0A0B4J1U4 118 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 A0A1B0GTH9 108 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 LRRC3CA6NJW4 275 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 ALG1L2C9J202 215 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 HMGN4O00479 90 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 SUSD5O60279 629 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 SNX3O60493 162 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 HCN1O60741 890 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 WISP2O76076 250 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 PTPN6P29350 595 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 PTGS2P35354 604 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 DCTP40126 519 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 DSTNP60981 165 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 GTF3C1Q12789 2109 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 NFYCQ13952 458 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 CYLC2Q14093 348 aaPredicted RBP14.58□□□□□ -0.08
RAB40C-208ENST00000564703 GNA13Q14344 377 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 RGNQ15493 299 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 GTDC1Q4AE62 458 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 COX20Q5RI15 118 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 FNDC7Q5VTL7 733 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 HEPHL1Q6MZM0 1159 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 ZAR1Q86SH2 424 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 MTDHQ86UE4 582 aaKnown RBP14.58□□□□□ -0.08
RAB40C-208ENST00000564703 ZNF614Q8N883 585 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 WDSUB1Q8N9V3 476 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 PCYOX1LQ8NBM8 494 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 RNF138Q8WVD3 245 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 NTNG2Q96CW9 530 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 AURKBQ96GD4 344 aaPredicted RBP14.58□□□□□ -0.08
RAB40C-208ENST00000564703 TRNT1Q96Q11 434 aaKnown RBP14.58□□□□□ -0.08
RAB40C-208ENST00000564703 NMUR2Q9GZQ4 415 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 ZNF703Q9H7S9 590 aaPredicted RBP14.58□□□□□ -0.08
RAB40C-208ENST00000564703 CALML5Q9NZT1 146 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 P2RX2Q9UBL9 471 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 MKLN1Q9UL63 735 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 WDR45Q9Y484 360 aa14.58□□□□□ -0.08
RAB40C-208ENST00000564703 A0A1W2PQD3 144 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 PRRG2O14669 202 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 FCMRO60667 390 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 GUSBP08236 651 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 MSX1P28360 303 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 UQCRFS1P47985 274 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 GAS1P54826 345 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 FADDQ13158 208 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 MTERF4Q7Z6M4 381 aaKnown RBP14.57□□□□□ -0.08
RAB40C-208ENST00000564703 DHDDSQ86SQ9 333 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 SPPL2CQ8IUH8 684 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 DPP10Q8N608 796 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 OR14L1PQ8NHC6 308 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 PHOSPHO1Q8TCT1 267 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 PMM1Q92871 262 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 SARAFQ96BY9 339 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 THUMPD3Q9BV44 507 aaKnown RBP14.57□□□□□ -0.08
RAB40C-208ENST00000564703 DSN1Q9H410 356 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 MTHFD2LQ9H903 347 aaPredicted RBP14.57□□□□□ -0.08
RAB40C-208ENST00000564703 CACYBPQ9HB71 228 aaKnown RBP14.57□□□□□ -0.08
RAB40C-208ENST00000564703 GID8Q9NWU2 228 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 FAM53CQ9NYF3 392 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 MED11Q9P086 117 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 VAPAQ9P0L0 249 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 SLAMF8Q9P0V8 285 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 DKKL1Q9UK85 242 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 ACAD8Q9UKU7 415 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 DTNAQ9Y4J8 743 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 FREM3P0C091 2139 aa14.57□□□□□ -0.08
RAB40C-208ENST00000564703 DNAJC13O75165 2243 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 TRGV8A0A0C4DH27 118 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 BBIP1A8MTZ0 92 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 SLC19A2O60779 497 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 NPPAP01160 153 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 IGHG3P01860 377 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 HPNP05981 417 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 CELA3AP09093 270 aa14.56□□□□□ -0.08
RAB40C-208ENST00000564703 ETFAP13804 333 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms