RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 CNBD2Q96M20 576 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 VSTM2LQ96N03 204 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 ZPBPQ9BS86 351 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 AMBRA1Q9C0C7 1298 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 ANKRD19PQ9H560 264 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 WDR54Q9H977 334 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 ANKRA2Q9H9E1 313 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 ZNF556Q9HAH1 456 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 PNPLA3Q9NST1 481 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 PDP1Q9P0J1 537 aaPredicted RBP9□□□□□ -0.97
UBFD1-202ENST00000563366 C19orf25Q9UFG5 118 aaPredicted RBP9□□□□□ -0.97
UBFD1-202ENST00000563366 SCOCQ9UIL1 159 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 KCND3Q9UK17 655 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 ACAD8Q9UKU7 415 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 MKL2Q9ULH7 1088 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 ERVK-19Q9WJR5 959 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 ZNF443Q9Y2A4 671 aaPredicted RBP9□□□□□ -0.97
UBFD1-202ENST00000563366 TESMINQ9Y4I5 508 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 CLDN16Q9Y5I7 305 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 LYVE1Q9Y5Y7 322 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 COL27A1Q8IZC6 1860 aaPredicted RBP9□□□□□ -0.97
UBFD1-202ENST00000563366 USP34Q70CQ2 3546 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 ZNF318Q5VUA4 2279 aa9□□□□□ -0.97
UBFD1-202ENST00000563366 FAM86C2PA6NEL3 165 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 AGAP5A6NIR3 686 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 AP3D1O14617 1153 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 UGT2B11O75310 529 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 JRKO75564 520 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 PF4P02776 101 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 H1F0P07305 194 aaKnown RBP8.99□□□□□ -0.97
UBFD1-202ENST00000563366 ZGLP1P0C6A0 271 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 RPS4Y1P22090 263 aaKnown RBP8.99□□□□□ -0.97
UBFD1-202ENST00000563366 MYF6P23409 242 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 SSTR4P31391 388 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 GABRA3P34903 492 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 PDX1P52945 283 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 CDH12P55289 794 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 PSG6Q00889 435 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 PUM1Q14671 1186 aaKnown RBP eCLIP8.99□□□□□ -0.97
UBFD1-202ENST00000563366 GPR68Q15743 365 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 CSRP2Q16527 193 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 DECR1Q16698 335 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 MICAQ29983 383 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 FLYWCH1Q4VC44 716 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 KDM4DQ6B0I6 523 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 PWWP2BQ6NUJ5 590 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 SLC29A4Q7RTT9 530 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 ZNF605Q86T29 641 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 CHERPQ8IWX8 916 aaKnown RBP8.99□□□□□ -0.97
UBFD1-202ENST00000563366 ATG16L2Q8NAA4 619 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 SETD9Q8NE22 299 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 C16orf52Q8NHV5 167 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 STT3BQ8TCJ2 826 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 STK35Q8TDR2 534 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.99□□□□□ -0.97
UBFD1-202ENST00000563366 CYGBQ8WWM9 190 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 DHRS1Q96LJ7 313 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 PRRC1Q96M27 445 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 VN1R1Q9GZP7 353 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 HOXD1Q9GZZ0 328 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 PNO1Q9NRX1 252 aaKnown RBP8.99□□□□□ -0.97
UBFD1-202ENST00000563366 KRT84Q9NSB2 600 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 RXFP3Q9NSD7 469 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 POFUT2Q9Y2G5 429 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 OR10H1Q9Y4A9 318 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 PCDHGA1Q9Y5H4 931 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 KCNE3Q9Y6H6 103 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 NINQ8N4C6 2090 aa8.99□□□□□ -0.97
UBFD1-202ENST00000563366 MYOCOSA0A1B0GUC4 107 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 A0A1W2PRQ8 180 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 C9J4A7 227 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 FAAHO00519 579 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 DLGAP1O14490 977 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 CDX4O14627 284 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 FMO6PO60774 539 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 RFPL3O75679 317 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 DIRAS1O95057 198 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 CCNB2O95067 398 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 KCNK2O95069 426 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 HEXBP07686 556 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 GSTP1P09211 210 aaKnown RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 ITGAMP11215 1152 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 CD59P13987 128 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 TNFRSF1BP20333 461 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 KRT20P35900 424 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 PIGAP37287 484 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 IFNGR2P38484 337 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 PPICP45877 212 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 IST1P53990 364 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 TPD52P55327 224 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 SLC37A1P57057 533 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 RGS8P57771 180 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 RAC1P63000 192 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 EIF3IQ13347 325 aaKnown RBP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 DGCR6Q14129 220 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 POU4F3Q15319 338 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.98□□□□□ -0.97
UBFD1-202ENST00000563366 CYP27C1Q4G0S4 372 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 VWA2Q5GFL6 755 aa8.98□□□□□ -0.97
UBFD1-202ENST00000563366 DCST1Q5T197 706 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms