RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 UHMK1Q8TAS1 419 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 WDR20Q8TBZ3 569 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 ZNF675Q8TD23 568 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 ABHD3Q8WU67 409 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 UBTD2Q8WUN7 234 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 EFHD2Q96C19 240 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 CNRIP1Q96F85 164 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 SORCS2Q96PQ0 1159 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 NAP1L3Q99457 506 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 CENPKQ9BS16 269 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 PIMREGQ9BSJ6 248 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 BPESC1Q9GZL8 116 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 MCTS1Q9ULC4 181 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 PCDHA9Q9Y5H5 950 aa6.8□□□□□ -1.32
HERPUD1-206ENST00000563343 LOC390937A0A1W2PQ73 354 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 ESYT3A0FGR9 886 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 H0YIV9 168 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 K7EPI3 171 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 LILRA1O75019 489 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 LYZL6O75951 148 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 OPN1LWP04000 364 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 TACSTD2P09758 323 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 CREB1P16220 341 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 ZNF17P17021 662 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 COX5AP20674 150 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 IL12BP29460 328 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 CDH15P55291 814 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 HILS1P60008 231 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 PSG6Q00889 435 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 LGALS3BPQ08380 585 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 STX5Q13190 355 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 ZNF239Q16600 458 aaKnown RBP6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 SWI5Q1ZZU3 235 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 ZNF628Q5EBL2 1059 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 TIMM23BQ5SRD1 257 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 LGSNQ5TDP6 509 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 STEAP4Q687X5 459 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 FAM180BQ6P0A1 224 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 TREML4Q6UXN2 200 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 Q6ZT83 130 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 ESPNLQ6ZVH7 1005 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 PEG10Q86TG7 708 aaKnown RBP6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 TXLNBQ8N3L3 684 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 OR2V1Q8NHB1 315 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 DUSP19Q8WTR2 217 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 MAIP1Q8WWC4 291 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 MTBPQ96DY7 904 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 KLHDC3Q9BQ90 382 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 DESI2Q9BSY9 194 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 SRXN1Q9BYN0 137 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 METTL17Q9H7H0 456 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 PTGES2Q9H7Z7 377 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 KLHL13Q9P2N7 655 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 PRSS50Q9UI38 385 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 ING1Q9UK53 422 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 ABCG2Q9UNQ0 655 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 MGAT4BQ9UQ53 548 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 PCDHGB1Q9Y5G3 927 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 PCDHGA11Q9Y5H2 935 aa6.79□□□□□ -1.32
HERPUD1-206ENST00000563343 C1orf226A1L170 272 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 OR5H1A6NKK0 313 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 FOXE1O00358 373 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 ERAL1O75616 437 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 SEMA3DO95025 777 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 SYNGR4O95473 234 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 DHRS4L1P0CG22 281 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 CSNK2A2P19784 350 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 IGHV1-2P23083 117 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 CD40P25942 277 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 SHC1P29353 583 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 DVL1P1P54792 670 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 RAC1P63000 192 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 PSPHP78330 225 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 STK11Q15831 433 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 TMEM201Q5SNT2 666 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 LIPJQ5W064 366 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 SLC22A25Q6T423 547 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 SHISA2Q6UWI4 295 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 APOOLQ6UXV4 268 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 RINLQ6ZS11 566 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 USP43Q70EL4 1123 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 MARCH3Q86UD3 253 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 WDR75Q8IWA0 830 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 PPIL6Q8IXY8 311 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 GTPBP8Q8N3Z3 284 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 LINC01356Q8N9X3 169 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 ATOH8Q96SQ7 321 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 NAT9Q9BTE0 207 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 RBM4Q9BWF3 364 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 CAB39LQ9H9S4 337 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 GP6Q9HCN6 339 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 PPANQ9NQ55 473 aaKnown RBP6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 SDHAF3Q9NRP4 125 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 CD274Q9NZQ7 290 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 OPTCQ9UBM4 332 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 ADAM29Q9UKF5 820 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 VDAC3Q9Y277 283 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 RYR3Q15413 4870 aa6.78□□□□□ -1.32
HERPUD1-206ENST00000563343 C7orf72A4D263 438 aa6.77□□□□□ -1.33
HERPUD1-206ENST00000563343 GOLGA6L10A6NI86 522 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms