RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 COQ3Q9NZJ6 369 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 CNIH4Q9P003 139 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 SPRR3Q9UBC9 169 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 LEF1Q9UJU2 399 aaPredicted RBP14.32□□□□□ -0.12
USB1-208ENST00000563207 NDUFAF1Q9Y375 327 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 FAM215AQ9Y5M1 114 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.32□□□□□ -0.12
USB1-208ENST00000563207 FREM3P0C091 2139 aa14.32□□□□□ -0.12
USB1-208ENST00000563207 A0A096LPI6 279 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 OR6C70A6NIJ9 312 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 LRRC3CA6NJW4 275 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 KDM4EB2RXH2 506 aaPredicted RBP14.31□□□□□ -0.12
USB1-208ENST00000563207 ANGPT2O15123 496 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 KCNH1O95259 989 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 KRT75O95678 551 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 AGR2O95994 175 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 IGHG3P01860 377 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 P04436 131 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 GABRA3P34903 492 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 CHI3L1P36222 383 aaPredicted RBP14.31□□□□□ -0.12
USB1-208ENST00000563207 ANXA11P50995 505 aaKnown RBP14.31□□□□□ -0.12
USB1-208ENST00000563207 PNLIPRP2P54317 469 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 CORO7P57737 925 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 PLCXD2Q0VAA5 305 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 KLF10Q13118 480 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 GAB1Q13480 694 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 DECR1Q16698 335 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 COQ5Q5HYK3 327 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 C6orf10Q5SRN2 563 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 SLC22A10Q63ZE4 541 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 SAXO2Q658L1 398 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 BICRALQ6AI39 1079 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 TMEM81Q6P7N7 255 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 NPSR1Q6W5P4 371 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 GK5Q6ZS86 529 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 SLC22A16Q86VW1 577 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 LIX1LQ8IVB5 337 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 ANKS4BQ8N8V4 417 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 LILRB4Q8NHJ6 448 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 GPR151Q8TDV0 419 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 ADAMTS15Q8TE58 950 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 SLC9A6Q92581 669 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 RND1Q92730 232 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 OMA1Q96E52 524 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 SLC35A4Q96G79 324 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 SLC35G5Q96KT7 338 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 SPOCK3Q9BQ16 436 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 TREX2Q9BQ50 279 aaPredicted RBP14.31□□□□□ -0.12
USB1-208ENST00000563207 SLC35A5Q9BS91 424 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 INPP5KQ9BT40 448 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 NMUR2Q9GZQ4 415 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 PIGUQ9H490 435 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 CBLCQ9ULV8 474 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 ARL2BPQ9Y2Y0 163 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 CAPN7Q9Y6W3 813 aa14.31□□□□□ -0.12
USB1-208ENST00000563207 A0A1B0GVC2 190 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 ANKRD33BA6NCL7 494 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 ACOT7O00154 380 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 AK1P00568 194 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 GLI4P10075 376 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 CAPN3P20807 821 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 MATN1P21941 496 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 PPIBP23284 216 aaKnown RBP14.3□□□□□ -0.12
USB1-208ENST00000563207 LCN1P31025 176 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 ADH7P40394 386 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 TLE4Q04727 773 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 SNTB1Q13884 538 aaKnown RBP14.3□□□□□ -0.12
USB1-208ENST00000563207 EFR3AQ14156 821 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 NNATQ16517 81 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 TBCELQ5QJ74 424 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 LRIF1Q5T3J3 769 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 GKAP1Q5VSY0 366 aaPredicted RBP14.3□□□□□ -0.12
USB1-208ENST00000563207 DESI1Q6ICB0 168 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 FAM109AQ8N4B1 249 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 DPP10Q8N608 796 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 SLC16A11Q8NCK7 471 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 FAM13CQ8NE31 585 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 OR5AK3PQ8NH89 298 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 PAQR8Q8TEZ7 354 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 DIO2Q92813 273 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 TMBIM1Q969X1 311 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 TMCO6Q96DC7 493 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 C16orf58Q96GQ5 468 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 COL21A1Q96P44 957 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 TTYH2Q9BSA4 534 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 BTBD2Q9BX70 525 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 RAD21L1Q9H4I0 556 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 GMEB1Q9Y692 573 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 CHCHD2Q9Y6H1 151 aaPredicted RBP14.3□□□□□ -0.12
USB1-208ENST00000563207 KIAA1549Q9HCM3 1950 aa14.3□□□□□ -0.12
USB1-208ENST00000563207 A0A0G2JNJ9 132 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 BBIP1A8MTZ0 92 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 TSPAN2O60636 221 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 NME6O75414 186 aaPredicted RBP14.29□□□□□ -0.12
USB1-208ENST00000563207 REM1O75628 298 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 NPPAP01160 153 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 ACP2P11117 423 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 IGFBP2P18065 325 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 ACVR2AP27037 513 aa14.29□□□□□ -0.12
USB1-208ENST00000563207 PTPN6P29350 595 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms