RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TRMT61BQ9BVS5 477 aaKnown RBP12.22□□□□□ -0.45
USB1-207ENST00000563149 C1QTNF2Q9BXJ5 285 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 RNF32Q9H0A6 362 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 KIR3DX1Q9H7L2 352 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 POLMQ9NP87 494 aaPredicted RBP12.22□□□□□ -0.45
USB1-207ENST00000563149 EQTNQ9NQ60 294 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 ACOXLQ9NUZ1 547 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 BABAM2Q9NXR7 383 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 ING3Q9NXR8 418 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 PTGFRNQ9P2B2 879 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 OR1A2Q9Y585 309 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 ALG5Q9Y673 324 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 HEATR5BQ9P2D3 2071 aa12.22□□□□□ -0.45
USB1-207ENST00000563149 BRCA2P51587 3418 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 SMIM30A4D0T7 59 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 OR6C70A6NIJ9 312 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 GTPBP1O00178 669 aaKnown RBP12.21□□□□□ -0.45
USB1-207ENST00000563149 ADH1BP00325 375 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 THY1P04216 161 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 GPR4P46093 362 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 GZMKP49863 264 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 PDX1P52945 283 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 BTG1P62324 171 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 SHC2P98077 582 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 CD83Q01151 205 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 DUSP8Q13202 625 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 P2RY14Q15391 338 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 CST6Q15828 149 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 FAM78AQ5JUQ0 283 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 HACD4Q5VWC8 232 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 VASNQ6EMK4 673 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 MFSD12Q6NUT3 480 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 RPL13AP3Q6NVV1 102 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 MEPCEQ7L2J0 689 aaKnown RBP12.21□□□□□ -0.45
USB1-207ENST00000563149 RANBP3LQ86VV4 465 aaPredicted RBP12.21□□□□□ -0.45
USB1-207ENST00000563149 KLBQ86Z14 1044 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 HDDC3Q8N4P3 179 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 SMARCD2Q92925 531 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 SENP5Q96HI0 755 aaPredicted RBP12.21□□□□□ -0.45
USB1-207ENST00000563149 C10orf90Q96M02 699 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 NDEL1Q9GZM8 345 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 FOLH1BQ9HBA9 442 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 HINT3Q9NQE9 182 aaKnown RBP12.21□□□□□ -0.45
USB1-207ENST00000563149 SLC17A4Q9Y2C5 497 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 WDR45Q9Y484 360 aa12.21□□□□□ -0.45
USB1-207ENST00000563149 SHISA3A0PJX4 238 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 UNC119BA6NIH7 251 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 MID1O15344 667 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 RNGTTO60942 597 aaKnown RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 ASGR2P07307 311 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 C5AR1P21730 350 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 F8A1P23610 371 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 PEBP1P30086 187 aaKnown RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 PTGER1P34995 402 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 RAB8AP61006 207 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 RPS15AP62244 130 aaKnown RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 RGS1Q08116 209 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 RPE65Q16518 533 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 ZNF791Q3KP31 576 aaPredicted RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 BICRALQ6AI39 1079 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 HBMQ6B0K9 141 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 TPRA1Q86W33 373 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 LRRC28Q86X40 367 aaPredicted RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 CPOQ8IVL8 374 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 SFTPA1Q8IWL2 248 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 LRRC25Q8N386 305 aaPredicted RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 FBXL6Q8N531 539 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 YIPF7Q8N8F6 280 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 NLGN4YQ8NFZ3 816 aaPredicted RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 OR52L1Q8NGH7 329 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 OR5M3Q8NGP4 307 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 NT5CQ8TCD5 201 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 TMEM255BQ8WV15 326 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 KLK6Q92876 244 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 CREB3L1Q96BA8 519 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 AHCYL2Q96HN2 611 aaKnown RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 SAMD8Q96LT4 415 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 DCLRE1CQ96SD1 692 aaKnown RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 MACROD1Q9BQ69 325 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 GTPBP2Q9BX10 602 aaKnown RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 RSPH9Q9H1X1 276 aaPredicted RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 UBQLN3Q9H347 655 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 EVA1AQ9H8M9 152 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 RPRD1BQ9NQG5 326 aaKnown RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 KCNK6Q9Y257 313 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 CSNK1G3Q9Y6M4 447 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 COLEC10Q9Y6Z7 277 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 TRAPPC13A5PLN9 417 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 CD8B2A6NJW9 211 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 SOCS6O14544 535 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 FCMRO60667 390 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 ZIC2O95409 532 aaPredicted RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 STATHP02808 62 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 CEACAM5P06731 702 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 CD8BP10966 210 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 GCGRP47871 477 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 RFX3P48380 749 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 TAS2R43P59537 309 aa12.2□□□□□ -0.46
USB1-207ENST00000563149 RRAS2P62070 204 aaPredicted RBP12.2□□□□□ -0.46
USB1-207ENST00000563149 BTN3A2P78410 334 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms