RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 CDHR4A6H8M9 788 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 METTL15A6NJ78 407 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 I3L1I5 382 aaPredicted RBP19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 BRINP1O60477 761 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 CTNSO60931 367 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 THY1P04216 161 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 GRK5P34947 590 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 RAB40BQ12829 278 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 UBXN2BQ14CS0 331 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 MAPK14Q16539 360 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 RGS21Q2M5E4 152 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 C3orf38Q5JPI3 329 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 MRPL2Q5T653 305 aaKnown RBP19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 GARNL3Q5VVW2 1013 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 OR52R1Q8NGF1 315 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 OR52I1Q8NGK6 324 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 OR8D4Q8NGM9 314 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 OR9Q1Q8NGQ5 310 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 OPALINQ96PE5 141 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 LMF2Q9BU23 707 aaKnown RBP19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 CHCHD3Q9NX63 227 aaKnown RBP19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 IL20Q9NYY1 176 aa19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 TESQ9UGI8 421 aaKnown RBP19.84■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 CSO75390 466 aaKnown RBP19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 CBX7O95931 251 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 MYL12AP19105 171 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 ENDOUP21128 410 aaKnown RBP19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 TGFBR1P36897 503 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 MLLT1Q03111 559 aaPredicted RBP19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 STX4Q12846 297 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 SLC13A2Q13183 592 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 ITGADQ13349 1161 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 FAM53BQ14153 422 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 INAQ16352 499 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 MINDY4Q4G0A6 757 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 GDPGP1Q6ZNW5 385 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 BCDIN3DQ7Z5W3 292 aaKnown RBP19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 ATCAYQ86WG3 371 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 MEX3DQ86XN8 651 aaKnown RBP19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 SDR16C5Q8N3Y7 309 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 MFSD4AQ8N468 514 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 TMEM255BQ8WV15 326 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 RFKQ969G6 155 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 COX4I2Q96KJ9 171 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 MAP3K3Q99759 626 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 FGF20Q9NP95 211 aaPredicted RBP19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 PLCL2Q9UPR0 1127 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 CDH10Q9Y6N8 788 aa19.83■□□□□ 0.77
VPS9D1-AS1-202ENST00000562866 CENPVL1A0A0U1RR11 272 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 KDM4EB2RXH2 506 aaPredicted RBP19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 CLDN4O14493 209 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 NSA2O95478 260 aaKnown RBP19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 HMGN1P05114 100 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 CKMT1AP12532 417 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 GNSP15586 552 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 GPR4P46093 362 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 MLLT11Q13015 90 aaPredicted RBP19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 FIGNL1Q6PIW4 674 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 ZNF620Q6ZNG0 422 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 DEFB119Q8N690 84 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 CHPT1Q8WUD6 406 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 RIT1Q92963 219 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 RBM18Q96H35 190 aaKnown RBP19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 ZNF285Q96NJ3 590 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 ZNF559Q9BR84 538 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 NXF2Q9GZY0 626 aaKnown RBP19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 GALNT8Q9NY28 637 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 HCN3Q9P1Z3 774 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 CLEC2DQ9UHP7 191 aa19.83■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 GXYLT2A0PJZ3 443 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 CBFA2T3O75081 653 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 SULT1C4O75897 302 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 BMP4P12644 408 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 IGLV3-21P80748 117 aaPredicted RBP19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 OR1Q1Q15612 314 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 SSX1Q16384 188 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 ZSWIM7Q19AV6 140 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 TUBA3EQ6PEY2 450 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 C17orf82Q86X59 251 aaPredicted RBP19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 POGLUT1Q8NBL1 392 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 ANKK1Q8NFD2 765 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 PPP1R14BQ96C90 147 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 RNFT2Q96EX2 444 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 SHDQ96IW2 340 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 CENPOQ9BU64 300 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 CHRNA10Q9GZZ6 450 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 FOLH1BQ9HBA9 442 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 PRTFDC1Q9NRG1 225 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 FAIMQ9NVQ4 179 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 SEC14L4Q9UDX3 406 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 EPHA6Q9UF33 1036 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 CFL2Q9Y281 166 aa19.82■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 ANKRD33BA6NCL7 494 aa19.81■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 PEX12O00623 359 aa19.81■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 KCNK2O95069 426 aa19.81■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 CTSBP07858 339 aa19.81■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 SOX6P35712 828 aa19.81■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 MLLT3P42568 568 aaPredicted RBP19.81■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 PPM1FP49593 454 aaPredicted RBP19.81■□□□□ 0.76
VPS9D1-AS1-202ENST00000562866 HNRNPKP61978 463 aaKnown RBP eCLIP19.81■□□□□ 0.762e-7■■■■■ 29.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms