RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ASNA1O43681 348 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 HS6ST1O60243 411 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 RASAL1O95294 804 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 WISP1O95388 367 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 KRT75O95678 551 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 P04436 131 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 TFPTP0C1Z6 253 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 BMP2P12643 396 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 GPX2P18283 190 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 CRATP43155 626 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 TMED10P49755 219 aaKnown RBP8.94□□□□□ -0.98
CLK3-208ENST00000562626 DSTNP60981 165 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 FOXK1P85037 733 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 HSF1Q00613 529 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 TLE1Q04724 770 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 CHRNEQ04844 493 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 STX5Q13190 355 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 CYLC2Q14093 348 aaPredicted RBP8.94□□□□□ -0.98
CLK3-208ENST00000562626 GPR68Q15743 365 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 CD226Q15762 336 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 ADRM1Q16186 407 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 IGFBP7Q16270 282 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 TRMT5Q32P41 509 aaKnown RBP8.94□□□□□ -0.98
CLK3-208ENST00000562626 RABL3Q5HYI8 236 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 GKAP1Q5VSY0 366 aaPredicted RBP8.94□□□□□ -0.98
CLK3-208ENST00000562626 NANOGP8Q6NSW7 305 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 TMEM81Q6P7N7 255 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 BHLHB9Q6PI77 547 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 PRICKLE2Q7Z3G6 844 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 PTOV1Q86YD1 416 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 CHERPQ8IWX8 916 aaKnown RBP8.94□□□□□ -0.98
CLK3-208ENST00000562626 DND1Q8IYX4 353 aaKnown RBP8.94□□□□□ -0.98
CLK3-208ENST00000562626 TMEM251Q8N6I4 163 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 TRIML2Q8N7C3 387 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 ANKS4BQ8N8V4 417 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 CCDC197Q8NCU1 140 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 RP9Q8TA86 221 aaKnown RBP8.94□□□□□ -0.98
CLK3-208ENST00000562626 CPT1CQ8TCG5 803 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 BCAS4Q8TDM0 211 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 SLC38A5Q8WUX1 472 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 LRRC58Q96CX6 371 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 FAM173AQ9BQD7 235 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 OSBPL11Q9BXB4 747 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 ZNF350Q9GZX5 532 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 SLC38A1Q9H2H9 487 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 METTL7AQ9H8H3 244 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 NANOGQ9H9S0 305 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 CNIH4Q9P003 139 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.94□□□□□ -0.98
CLK3-208ENST00000562626 FBXL2Q9UKC9 423 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 MKLN1Q9UL63 735 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.94□□□□□ -0.98
CLK3-208ENST00000562626 PCNX1Q96RV3 2341 aa8.94□□□□□ -0.98
CLK3-208ENST00000562626 ANKRD33BA6NCL7 494 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 CLDN24A6NM45 220 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 KLRC4-KLRK1H3BQV0 150 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 AIM2O14862 343 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 SNPHO15079 494 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 KIAA0513O60268 411 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 UGT2B17O75795 530 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 H6PDO95479 791 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 CBX6O95503 412 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 BCHEP06276 602 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 KRT16P08779 473 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 ARAFP10398 606 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 TBXA2RP21731 343 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 SLC6A2P23975 617 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 KRT20P35900 424 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 DCTP40126 519 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 MAGEA5P43359 124 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 KCNJ2P63252 427 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 SRSF1Q07955 248 aaKnown RBP eCLIP8.93□□□□□ -0.98
CLK3-208ENST00000562626 EFR3AQ14156 821 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 CMPK2Q5EBM0 449 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 COQ5Q5HYK3 327 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 FAM91A1Q658Y4 838 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 C8orf82Q6P1X6 216 aaPredicted RBP8.93□□□□□ -0.98
CLK3-208ENST00000562626 C16orf62Q7Z3J2 963 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 FGD2Q7Z6J4 655 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 COMTD1Q86VU5 262 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 FAR1Q8WVX9 515 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 TMEM19Q96HH6 336 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 TMEM41AQ96HV5 264 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 JSRP1Q96MG2 331 aaPredicted RBP8.93□□□□□ -0.98
CLK3-208ENST00000562626 GNRHR2Q96P88 292 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 SECISBP2Q96T21 854 aaKnown RBP8.93□□□□□ -0.98
CLK3-208ENST00000562626 NPAS1Q99742 590 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 SLX1AQ9BQ83 275 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 GPATCH1Q9BRR8 931 aaKnown RBP8.93□□□□□ -0.98
CLK3-208ENST00000562626 DOHHQ9BU89 302 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 SAP130Q9H0E3 1048 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 UBQLN3Q9H347 655 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 PIF1Q9H611 641 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 ZNF703Q9H7S9 590 aaPredicted RBP8.93□□□□□ -0.98
CLK3-208ENST00000562626 CMTM6Q9NX76 183 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 KLRF1Q9NZS2 232 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 CHST2Q9Y4C5 530 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 WIF1Q9Y5W5 379 aa8.93□□□□□ -0.98
CLK3-208ENST00000562626 DIDO1Q9BTC0 2240 aaKnown RBP8.93□□□□□ -0.98
CLK3-208ENST00000562626 DSPPQ9NZW4 1301 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms