RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ACSL1P33121 698 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 EIF1P41567 113 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 PREPP48147 710 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 SERPINA13PQ6UXR4 307 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 RNF165Q6ZSG1 346 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 Q6ZTK2 550 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 SYT12Q8IV01 421 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 OR2A12Q8NGT7 310 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 NARS2Q96I59 477 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 HHIPQ96QV1 700 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 UBL7Q96S82 380 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 SPATA5L1Q9BVQ7 753 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 CERS4Q9HA82 394 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 THSD1Q9NS62 852 aa13.16□□□□□ -0.3
GTF3C1-203ENST00000562609 GABRPO00591 440 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 PRKYO43930 277 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 MT-ND4P03905 459 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 LAMP1P11279 417 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 PRPS1L1P21108 318 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 CRATP43155 626 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 KCNJ5P48544 419 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 XKP51811 444 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 HMGA2P52926 109 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 BOP1Q14137 746 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 GPRC6AQ5T6X5 926 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 ZNF770Q6IQ21 691 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 HAGHLQ6PII5 290 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 FBXO46Q6PJ61 603 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 ASPGQ86U10 573 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 LRRC28Q86X40 367 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 SLC30A8Q8IWU4 369 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 NTMT1Q9BV86 223 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 ZDHHC4Q9NPG8 344 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 SEC14L3Q9UDX4 400 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 GSAPA4D1B5 854 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 GATCO43716 136 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 LEFTY1O75610 366 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 EGFP01133 1207 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 UGT2B7P16662 529 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 PVALBP20472 110 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 CCR7P32248 378 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 MAPK8P45983 427 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 SRSF11Q05519 484 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 ARSIQ5FYB1 569 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 TCEAL5Q5H9L2 206 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 C12orf73Q69YU5 71 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 Q6ZVL8 140 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 BTN2A1Q7KYR7 527 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 VRK3Q8IV63 474 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 C12orf45Q8N5I9 185 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 RPS6KB2Q9UBS0 482 aa13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 TESQ9UGI8 421 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-203ENST00000562609 TRBV5-4A0A0C4DH59 114 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 TRBV4-1A0A0J9YWV2 114 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 ANTXRLA6NF34 631 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 DVL2O14641 736 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 CLDN9O95484 217 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 POP4O95707 220 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 IFNA4P05014 189 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 DGKAP23743 735 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 CALCRP30988 508 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 S100A11P31949 105 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 RGS4P49798 205 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 LGALS3BPQ08380 585 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 ILKQ13418 452 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 GAB1Q13480 694 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 OCLNQ16625 522 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 TMEM240Q5SV17 173 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 NOXRED1Q6NXP6 359 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 JAZF1Q86VZ6 243 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 NR2C2APQ86WQ0 139 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 OR56B4Q8NH76 319 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 TCEAL3Q969E4 200 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 ECHDC3Q96DC8 303 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 MRPL48Q96GC5 212 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 LRR1Q96L50 414 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 ZNF251Q9BRH9 671 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 CRB3Q9BUF7 120 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 NIT2Q9NQR4 276 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 BTNL2Q9UIR0 455 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 MAFFQ9ULX9 164 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 SLC22A7Q9Y694 548 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 OR6C65A6NJZ3 312 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 OR2AG2A6NM03 316 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 SUSD5O60279 629 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 SPP1P10451 314 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 ETFAP13804 333 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 CEBPBP17676 345 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 CELP19835 753 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 VIPR2P41587 438 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 CSNK1DP48730 415 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 METAP1P53582 386 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 DHODHQ02127 395 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 SYT14P1Q58G82 188 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 CRB2Q5IJ48 1285 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 B3GNTL1Q67FW5 361 aaPredicted RBP13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 ZFP82Q8N141 532 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 ARIH2OSQ8N7S6 290 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 IL17RCQ8NAC3 791 aa13.14□□□□□ -0.31
GTF3C1-203ENST00000562609 SGK3Q96BR1 496 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms