RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SPG11Q96JI7 2443 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 IGLV3-32A0A0A0MS00 114 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 TMEM114B3SHH9 223 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 H0YC42 278 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 EMC8O43402 210 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 HCRTR2O43614 444 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 TYROBPO43914 113 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 GMFGO60234 142 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 KCNK2O95069 426 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 NKX2-2O95096 273 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 ANGPTL1O95841 491 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 BPGMP07738 259 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 ACP2P11117 423 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 EPXP11678 715 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 PEPDP12955 493 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 SERPINB5P36952 375 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 SUCLG1P53597 346 aaKnown RBP9.29□□□□□ -0.92
CLK3-205ENST00000561673 TPD52P55327 224 aaPredicted RBP9.29□□□□□ -0.92
CLK3-205ENST00000561673 C17orf67Q0P5P2 114 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 DAZAP2Q15038 168 aaPredicted RBP9.29□□□□□ -0.92
CLK3-205ENST00000561673 XKR7Q5GH72 579 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 RAET1LQ5VY80 246 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 CHMP1BQ7LBR1 199 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 SZRD1Q7Z422 152 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 R3HCC1LQ7Z5L2 792 aaKnown RBP9.29□□□□□ -0.92
CLK3-205ENST00000561673 LUZP2Q86TE4 346 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 GRAMD2AQ8IUY3 354 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 UBQLNLQ8IYU4 475 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 SLC16A11Q8NCK7 471 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 OR7A2PQ8NGA2 310 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 OR6Y1Q8NGX8 325 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 OR4C3Q8NH37 302 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 GOT1L1Q8NHS2 421 aaPredicted RBP9.29□□□□□ -0.92
CLK3-205ENST00000561673 FBXO30Q8TB52 745 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 FAM110BQ8TC76 370 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 NUDT8Q8WV74 236 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 MTERF3Q96E29 417 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 PPP3R2Q96LZ3 170 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 MS4A4EQ96PG1 132 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 YIPF4Q9BSR8 244 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 TMEM109Q9BVC6 243 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 RBM24Q9BX46 236 aaKnown RBP9.29□□□□□ -0.92
CLK3-205ENST00000561673 PTGES2Q9H7Z7 377 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.29□□□□□ -0.92
CLK3-205ENST00000561673 ATP6V1HQ9UI12 483 aa9.29□□□□□ -0.92
CLK3-205ENST00000561673 V9GYY5 206 aaPredicted RBP9.29□□□□□ -0.92
CLK3-205ENST00000561673 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 A0A1W2PNV4 684 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 OR2M5A3KFT3 312 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 SLC22A20A6NK97 555 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 A8MXE2 369 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 SHISA8B8ZZ34 492 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 LINC01387J3KSC0 135 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 SCAMP2O15127 329 aaKnown RBP9.28□□□□□ -0.92
CLK3-205ENST00000561673 TNFSF13O75888 250 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 OXSR1O95747 527 aaPredicted RBP9.28□□□□□ -0.92
CLK3-205ENST00000561673 LAMP1P11279 417 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 TBXA2RP21731 343 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 MAPK1P28482 360 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 HPCAL1P37235 193 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 ETV4P43268 484 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 ART1P52961 327 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 IST1P53990 364 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 CLDN20P56880 219 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 EEF1A1P68104 462 aaKnown RBP9.28□□□□□ -0.92
CLK3-205ENST00000561673 SORDQ00796 357 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 PTGR1Q14914 329 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 MLC1Q15049 377 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 DUSP5Q16690 384 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLK3-205ENST00000561673 TMEM44Q2T9K0 475 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 GLYR1Q49A26 553 aaPredicted RBP9.28□□□□□ -0.92
CLK3-205ENST00000561673 ATP6AP1LQ52LC2 224 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 EXOSC6Q5RKV6 272 aaKnown RBP9.28□□□□□ -0.92
CLK3-205ENST00000561673 C6orf136Q5SQH8 315 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 EEF1A1P5Q5VTE0 462 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 IL23RQ5VWK5 629 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 MFSD12Q6NUT3 480 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 ZCCHC12Q6PEW1 402 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 FIGNL1Q6PIW4 674 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 LRIG3Q6UXM1 1119 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 P4HA3Q7Z4N8 544 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 ZAR1Q86SH2 424 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 CDC20BQ86Y33 519 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 MEIOBQ8N635 442 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 STARD4Q96DR4 205 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 FAM120BQ96EK7 910 aaKnown RBP9.28□□□□□ -0.92
CLK3-205ENST00000561673 OTUB1Q96FW1 271 aaPredicted RBP9.28□□□□□ -0.92
CLK3-205ENST00000561673 PIGQQ9BRB3 760 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 C1orf50Q9BV19 199 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 ACBD3Q9H3P7 528 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 PIGMQ9H3S5 423 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 SIRT3Q9NTG7 399 aaPredicted RBP9.28□□□□□ -0.92
CLK3-205ENST00000561673 CCM2LQ9NUG4 571 aaPredicted RBP9.28□□□□□ -0.92
CLK3-205ENST00000561673 FBXO34Q9NWN3 711 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 GALNT8Q9NY28 637 aa9.28□□□□□ -0.92
CLK3-205ENST00000561673 ANKHD1Q8IWZ3 2542 aaKnown RBP9.27□□□□□ -0.93
CLK3-205ENST00000561673 A0A1W2PRB8 838 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 ALG1L2C9J202 215 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 H3BML4 177 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms