RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ADAM5Q6NVV9 412 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 LCLAT1Q6UWP7 414 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 Q6ZVQ6 151 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 STXBP4Q6ZWJ1 553 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ZNF720Q7Z2F6 126 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 NLRP14Q86W24 1093 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 SERPINA12Q8IW75 414 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 BATF2Q8N1L9 274 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 PDCL2Q8N4E4 241 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 WDSUB1Q8N9V3 476 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 SIDT2Q8NBJ9 832 aaKnown RBP3.17□□□□□ -1.9
HERC1-215ENST00000561436 CLEC1AQ8NC01 280 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 OR9Q2Q8NGE9 314 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 OR10G7Q8NGN6 311 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ZNF519Q8TB69 540 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 LRRC15Q8TF66 581 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 SETD7Q8WTS6 366 aaKnown RBP3.17□□□□□ -1.9
HERC1-215ENST00000561436 UBE2Q2Q8WVN8 375 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 RLN3Q8WXF3 142 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 PRCCQ92733 491 aaPredicted RBP3.17□□□□□ -1.9
HERC1-215ENST00000561436 SLCO2A1Q92959 643 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 FAM46BQ96A09 425 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 C8orf76Q96K31 380 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 NSMCE3Q96MG7 304 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 SPXQ9BT56 116 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 WWTR1Q9GZV5 400 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ABCG4Q9H172 646 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 LINC00597Q9H2U6 94 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 SGK2Q9HBY8 427 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ZDHHC18Q9NUE0 388 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ACOXLQ9NUZ1 547 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 MED17Q9NVC6 651 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ANO10Q9NW15 660 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 THAP10Q9P2Z0 257 aaPredicted RBP3.17□□□□□ -1.9
HERC1-215ENST00000561436 KLK11Q9UBX7 282 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 UBQLN2Q9UHD9 624 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 LSM7Q9UK45 103 aaKnown RBP3.17□□□□□ -1.9
HERC1-215ENST00000561436 GBF1Q92538 1859 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 ATP8B3O60423 1300 aa3.17□□□□□ -1.9
HERC1-215ENST00000561436 FAM186AA6NE01 2351 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 A0A1B0GTQ1 180 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 C5orf51A6NDU8 294 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 SLC9B1P1A6NJY1 282 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 MEI4A8MW99 385 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 SLC28A1O00337 649 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 RTCAO00442 366 aaKnown RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 TFECO14948 347 aaPredicted RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 CLDN1O95832 211 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 TNNC2P02585 160 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 GP1BAP07359 652 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CISD3P0C7P0 127 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CT45A8P0DMV1 189 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CT45A9P0DMV2 189 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 GAP43P17677 238 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CYP2F1P24903 491 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 NMT1P30419 496 aaKnown RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 PKLRP30613 574 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 ATP5C1P36542 298 aaKnown RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 LONP1P36776 959 aaKnown RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 ARRB1P49407 418 aaPredicted RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 TNFSF10P50591 281 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CCR4P51679 360 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CRIP2P52943 208 aaPredicted RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 ATP12AP54707 1039 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 GEMP55040 296 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 TMEM50BP56557 158 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 WASHC5Q12768 1159 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 SPHARQ15513 63 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 C3AR1Q16581 482 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 STX1AQ16623 288 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 MRGPRG-AS1Q2M3A8 158 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CT45A2Q5DJT8 189 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 RAB12Q6IQ22 244 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 FRRS1Q6ZNA5 592 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 C5orf24Q7Z6I8 188 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 ZSCAN30Q86W11 494 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 C17orf64Q86WR6 236 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CNTN4Q8IWV2 1026 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 ZC3H3Q8IXZ2 948 aaKnown RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 DND1Q8IYX4 353 aaKnown RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 ARHGAP18Q8N392 663 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 METTL4Q8N3J2 472 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 FBXW8Q8N3Y1 598 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CSGALNACT2Q8N6G5 542 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 ZNF614Q8N883 585 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CCDC197Q8NCU1 140 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 TRPV3Q8NET8 790 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 SMPDL3AQ92484 453 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 MED8Q96G25 268 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 ANKRD36BP1Q96IX9 119 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 EPSTI1Q96J88 318 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 ACCSQ96QU6 501 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 ZNF300Q96RE9 604 aaPredicted RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 CYP2S1Q96SQ9 504 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 S1PR3Q99500 378 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 OPRPNQ99935 248 aaPredicted RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 PIGQQ9BRB3 760 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 ACPTQ9BZG2 426 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 UBXN6Q9BZV1 441 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 TNMDQ9H2S6 317 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms