RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 OR52E6Q96RD3 313 aa13.89□□□□□ -0.19
SNRPA1-213ENST00000560856 TIMP4Q99727 224 aa13.89□□□□□ -0.19
SNRPA1-213ENST00000560856 TP63Q9H3D4 680 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-213ENST00000560856 DSN1Q9H410 356 aa13.89□□□□□ -0.19
SNRPA1-213ENST00000560856 PCDHGB4Q9UN71 923 aa13.89□□□□□ -0.19
SNRPA1-213ENST00000560856 SLC6A5Q9Y345 797 aa13.89□□□□□ -0.19
SNRPA1-213ENST00000560856 MRPS18CQ9Y3D5 142 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-213ENST00000560856 NPIPB9F8W1W9 429 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 BMP7P18075 431 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 MATN1P21941 496 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 SRD5A2P31213 254 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 DCST1Q5T197 706 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 AP1ARQ63HQ0 302 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 MTFR2Q6P444 385 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 FUNDC1Q8IVP5 155 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 MIER2Q8N344 545 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 CHDHQ8NE62 594 aaPredicted RBP13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 DUSP19Q8WTR2 217 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 NEURL3Q96EH8 262 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 SDF2Q99470 211 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 ZBTB18Q99592 522 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 EXO5Q9H790 373 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 SLC52A3Q9NQ40 469 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 SLC6A13Q9NSD5 602 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 SUCOQ9UBS9 1254 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 ACAD8Q9UKU7 415 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 PCDHGB3Q9Y5G1 929 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 FAM215AQ9Y5M1 114 aa13.88□□□□□ -0.19
SNRPA1-213ENST00000560856 PHF3Q92576 2039 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 A1L4Q6 167 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 PRAMEF27A3QJZ7 478 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 CCDC154A6NI56 674 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 POLR3GO15318 223 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 ATP8B1O43520 1251 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 ANGPTL1O95841 491 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 IL6P05231 212 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 ESRRAP11474 423 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 CD1EP15812 388 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 CASP9P55211 416 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 GFRA1P56159 465 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 B3GALT5-AS1P59052 145 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 CDSNQ15517 529 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 DCST2Q5T1A1 773 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 WLSQ5T9L3 541 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 HEPHL1Q6MZM0 1159 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 MRGPRGQ86SM5 289 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 ZNF808Q8N4W9 903 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 RFWD2Q8NHY2 731 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 THOC1Q96FV9 657 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 SLC35G5Q96KT7 338 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 G6PC3Q9BUM1 346 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 UGT2B28Q9BY64 529 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 OR51I1Q9H343 314 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 UBQLN4Q9NRR5 601 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 MED11Q9P086 117 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 PPP4R1LQ9P1A2 415 aa13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 PLEKHB1Q9UF11 243 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-213ENST00000560856 C15orf38-AP3S2A0A0A6YYH1 394 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 A0A1W2PQD3 144 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 FAM234BA2RU67 622 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 DUXAA6NLW8 204 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 GSNP06396 782 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 GP1BBP13224 206 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 ACVR2AP27037 513 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 DPP4P27487 766 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 POLR2JP52435 117 aaKnown RBP13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 C17orf67Q0P5P2 114 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 LRRC74AQ0VAA2 488 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 STX5Q13190 355 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 TOMM20Q15388 145 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 ZNF585AQ6P3V2 769 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 RPTNQ6XPR3 784 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 MSANTD1Q6ZTZ1 278 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 OLIG3Q7RTU3 272 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 ULK2Q8IYT8 1036 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 OR4K17Q8NGC6 315 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 ABTB1Q969K4 478 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 VPS33AQ96AX1 596 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 CHMP6Q96FZ7 201 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 WDYHV1Q96HA8 205 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 PANX1Q96RD7 426 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 KLHDC3Q9BQ90 382 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 SLC35A5Q9BS91 424 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 TBL1XR1Q9BZK7 514 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 PRDM14Q9GZV8 571 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 ZNF385DQ9H6B1 395 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 MED4Q9NPJ6 270 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 SDHAF3Q9NRP4 125 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 TAS2R10Q9NYW0 307 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 KCNE5Q9UJ90 142 aa13.86□□□□□ -0.19
SNRPA1-213ENST00000560856 NPIPA5A0A0B4J1W7 369 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 FIGNL2A6NMB9 653 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 KDM4EB2RXH2 506 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 NPIPA7E9PJI5 369 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 WDR1O75083 606 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 ZCCHC18P0CG32 403 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 NPIPA8P0DM63 369 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 OR12D1P0DN82 309 aa13.85□□□□□ -0.19
SNRPA1-213ENST00000560856 HOXB9P17482 250 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms