RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 BTLAQ7Z6A9 289 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 ZAR1Q86SH2 424 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 TRABD2AQ86V40 505 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 SLC16A11Q8NCK7 471 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 ZFP28Q8NHY6 868 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 NUDT8Q8WV74 236 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 TWIST2Q8WVJ9 160 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 STARD4Q96DR4 205 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 ZBED6CLQ96FA7 236 aaPredicted RBP9.22□□□□□ -0.93
LDLR-214ENST00000560628 PGM2Q96G03 612 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 APOPT1Q96IL0 206 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 ZNF845Q96IR2 970 aaPredicted RBP9.22□□□□□ -0.93
LDLR-214ENST00000560628 FCRL1Q96LA6 429 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 PIGQQ9BRB3 760 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 TRMOQ9BU70 441 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 PINK1Q9BXM7 581 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 OPN3Q9H1Y3 402 aaPredicted RBP9.22□□□□□ -0.93
LDLR-214ENST00000560628 ACBD3Q9H3P7 528 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 FBXO34Q9NWN3 711 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 PACSIN3Q9UKS6 424 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 EDARQ9UNE0 448 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 VDAC3Q9Y277 283 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 MED12LQ86YW9 2145 aa9.22□□□□□ -0.93
LDLR-214ENST00000560628 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 SH3D21A4FU49 640 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 TTC36A6NLP5 189 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 MSTNO14793 375 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 CASKO14936 926 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 EMC8O43402 210 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 NDUFB5O43674 189 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 NPHS1O60500 1241 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 TBX19O60806 448 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 TNFRSF21O75509 655 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 KCNK2O95069 426 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 SLU7O95391 586 aaKnown RBP9.21□□□□□ -0.94
LDLR-214ENST00000560628 HRGP04196 525 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 ALOX5P09917 674 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 CREB1P16220 341 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 MAP3K8P41279 467 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 KIR2DL2P43627 348 aaPredicted RBP9.21□□□□□ -0.94
LDLR-214ENST00000560628 EEFSECP57772 596 aaKnown RBP9.21□□□□□ -0.94
LDLR-214ENST00000560628 VSNL1P62760 191 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 EEF1A1P68104 462 aaKnown RBP9.21□□□□□ -0.94
LDLR-214ENST00000560628 PRR5P85299 388 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 IFFO1Q0D2I5 559 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 PDE7AQ13946 482 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 GANABQ14697 944 aaKnown RBP9.21□□□□□ -0.94
LDLR-214ENST00000560628 PON3Q15166 354 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 SGCBQ16585 318 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 DUSP5Q16690 384 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 VPS26BQ4G0F5 336 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 CCNJQ5T5M9 372 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 EEF1A1P5Q5VTE0 462 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 OR2A2Q6IF42 318 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 PPP4R4Q6NUP7 873 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 ZNF474Q6S9Z5 364 aaPredicted RBP9.21□□□□□ -0.94
LDLR-214ENST00000560628 CDRT4Q8N9R6 151 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 OR7A2PQ8NGA2 310 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 FNDC9Q8TBE3 224 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 TCP10LQ8TDR4 215 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.21□□□□□ -0.94
LDLR-214ENST00000560628 JADE3Q92613 823 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 HOXB13Q92826 284 aaPredicted RBP9.21□□□□□ -0.94
LDLR-214ENST00000560628 GIMAP5Q96F15 307 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 CHMP6Q96FZ7 201 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 C3orf30Q96M34 536 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 DACH2Q96NX9 599 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 WFIKKN1Q96NZ8 548 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 NPAS1Q99742 590 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 KLHDC3Q9BQ90 382 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 CXXC4Q9H2H0 198 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 PLEKHF2Q9H8W4 249 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 EML4Q9HC35 981 aaKnown RBP9.21□□□□□ -0.94
LDLR-214ENST00000560628 ACSS1Q9NUB1 689 aaPredicted RBP9.21□□□□□ -0.94
LDLR-214ENST00000560628 NDRG3Q9UGV2 375 aa9.21□□□□□ -0.94
LDLR-214ENST00000560628 ABCA4P78363 2273 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 IGLV3-32A0A0A0MS00 114 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 A0A1W2PPR1 153 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 A0A1W2PRB8 838 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 LINC01387J3KSC0 135 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 AQP8O94778 261 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 OXSR1O95747 527 aaPredicted RBP9.2□□□□□ -0.94
LDLR-214ENST00000560628 RAF1P04049 648 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 CRHP06850 196 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 IFI6P09912 130 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 LAMP1P11279 417 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 KLK2P20151 261 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 ARRB2P32121 409 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 FRKP42685 505 aaPredicted RBP9.2□□□□□ -0.94
LDLR-214ENST00000560628 ASMTP46597 345 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 SLC6A8P48029 635 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 RNF144AP50876 292 aaPredicted RBP9.2□□□□□ -0.94
LDLR-214ENST00000560628 KEAP1Q14145 624 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 TMEM44Q2T9K0 475 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 GLYR1Q49A26 553 aaPredicted RBP9.2□□□□□ -0.94
LDLR-214ENST00000560628 MFSD12Q6NUT3 480 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 PAMR1Q6UXH9 720 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 RNF165Q6ZSG1 346 aa9.2□□□□□ -0.94
LDLR-214ENST00000560628 R3HCC1LQ7Z5L2 792 aaKnown RBP9.2□□□□□ -0.94
LDLR-214ENST00000560628 TGIF2LYQ8IUE0 185 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms