RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 WDYHV1Q96HA8 205 aa21.14■□□□□ 0.97
CRNDE-209ENST00000560208 ZBTB18Q99592 522 aa21.14■□□□□ 0.97
CRNDE-209ENST00000560208 ZNF559Q9BR84 538 aa21.14■□□□□ 0.97
CRNDE-209ENST00000560208 C3orf14Q9HBI5 128 aa21.14■□□□□ 0.97
CRNDE-209ENST00000560208 SLC24A3Q9HC58 644 aa21.14■□□□□ 0.97
CRNDE-209ENST00000560208 KCNN3Q9UGI6 736 aa21.14■□□□□ 0.97
CRNDE-209ENST00000560208 DCTN4Q9UJW0 460 aa21.14■□□□□ 0.97
CRNDE-209ENST00000560208 VIMP08670 466 aaKnown RBP21.13■□□□□ 0.97
CRNDE-209ENST00000560208 IL12AP29459 219 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 IL12BP29460 328 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 CEACAM8P31997 349 aaPredicted RBP21.13■□□□□ 0.97
CRNDE-209ENST00000560208 SOAT1P35610 550 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 TIMP3P35625 211 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 PSPHP78330 225 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 SF3A3Q12874 501 aaKnown RBP eCLIP21.13■□□□□ 0.97
CRNDE-209ENST00000560208 EFR3AQ14156 821 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 MLC1Q15049 377 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 FAM174BQ3ZCQ3 159 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 ANKRD46Q86W74 232 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 NAXEQ8NCW5 288 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 RFWD2Q8NHY2 731 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 FBXO30Q8TB52 745 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 TESCQ96BS2 214 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 SIRT3Q9NTG7 399 aaPredicted RBP21.13■□□□□ 0.97
CRNDE-209ENST00000560208 ZCCHC3Q9NUD5 404 aaKnown RBP21.13■□□□□ 0.97
CRNDE-209ENST00000560208 ITGB1BP2Q9UKP3 347 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 OR10H1Q9Y4A9 318 aa21.13■□□□□ 0.97
CRNDE-209ENST00000560208 EMC8O43402 210 aa21.12■□□□□ 0.97
CRNDE-209ENST00000560208 CPSF4O95639 269 aaKnown RBP21.12■□□□□ 0.97
CRNDE-209ENST00000560208 ACTL6AO96019 429 aa21.12■□□□□ 0.97
CRNDE-209ENST00000560208 S100A3P33764 101 aa21.12■□□□□ 0.97
CRNDE-209ENST00000560208 GCKP35557 465 aa21.12■□□□□ 0.97
CRNDE-209ENST00000560208 DGKQP52824 942 aa21.12■□□□□ 0.97
CRNDE-209ENST00000560208 PNLIPRP2P54317 469 aa21.12■□□□□ 0.97
CRNDE-209ENST00000560208 MYBPHQ13203 477 aa21.12■□□□□ 0.97
CRNDE-209ENST00000560208 GSTA3Q16772 222 aa21.12■□□□□ 0.97
CRNDE-209ENST00000560208 PDCD4Q53EL6 469 aaKnown RBP21.12■□□□□ 0.97
CRNDE-209ENST00000560208 NSUN5P2Q63ZY6 315 aa21.12■□□□□ 0.97
CRNDE-209ENST00000560208 PLCZ1Q86YW0 608 aa21.12■□□□□ 0.97
CRNDE-209ENST00000560208 FAM120BQ96EK7 910 aaKnown RBP21.12■□□□□ 0.97
CRNDE-209ENST00000560208 CXorf36Q9H7Y0 433 aa21.12■□□□□ 0.97
CRNDE-209ENST00000560208 ANKHD1Q8IWZ3 2542 aaKnown RBP21.12■□□□□ 0.97
CRNDE-209ENST00000560208 DVL2O14641 736 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 SLC22A3O75751 556 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 PSMG1O95456 288 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 IL2RAP01589 272 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 PRR5P85299 388 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 ZNHIT3Q15649 155 aaPredicted RBP21.11■□□□□ 0.97
CRNDE-209ENST00000560208 CDH24Q86UP0 819 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 RELL2Q8NC24 303 aaPredicted RBP21.11■□□□□ 0.97
CRNDE-209ENST00000560208 OR4N2Q8NGD1 307 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 OR8J2Q8NGG1 315 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 OR4A15Q8NGL6 344 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 OR5AK3PQ8NH89 298 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 OR14L1PQ8NHC6 308 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 TRIB1Q96RU8 372 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 YIPF4Q9BSR8 244 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 CCDC28BQ9BUN5 200 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 OR2B2Q9GZK3 357 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 FGFR1OP2Q9NVK5 253 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 PCDHGB4Q9UN71 923 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 L3MBTL1Q9Y468 752 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 WIF1Q9Y5W5 379 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 MPDZO75970 2070 aa21.11■□□□□ 0.97
CRNDE-209ENST00000560208 CD8B2A6NJW9 211 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 RNASET2O00584 256 aaKnown RBP21.1■□□□□ 0.97
CRNDE-209ENST00000560208 IFI6P09912 130 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 BMP5P22003 454 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 MDH1P40925 334 aaKnown RBP21.1■□□□□ 0.97
CRNDE-209ENST00000560208 CCT3P49368 545 aaKnown RBP21.1■□□□□ 0.97
CRNDE-209ENST00000560208 STX1BP61266 288 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 HBA1P69905 142 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 PHC1P78364 1004 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 PSG6Q00889 435 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 TP53BP2Q13625 1128 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 DPY19L1Q2PZI1 675 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 ANXA8L1Q5VT79 327 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 ARSKQ6UWY0 536 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 MIER2Q8N344 545 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 VPS37AQ8NEZ2 397 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 SLC9A6Q92581 669 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 JADE3Q92613 823 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 EFHD2Q96C19 240 aaPredicted RBP21.1■□□□□ 0.97
CRNDE-209ENST00000560208 OTUB1Q96FW1 271 aaPredicted RBP21.1■□□□□ 0.97
CRNDE-209ENST00000560208 CHMP6Q96FZ7 201 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 MS4A4EQ96PG1 132 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 NEUROD4Q9HD90 331 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 ZNF629Q9UEG4 869 aaPredicted RBP21.1■□□□□ 0.97
CRNDE-209ENST00000560208 F8P00451 2351 aa21.1■□□□□ 0.97
CRNDE-209ENST00000560208 PCNX3Q9H6A9 2034 aa21.09■□□□□ 0.97
CRNDE-209ENST00000560208 A0A0G2JND7 137 aa21.09■□□□□ 0.97
CRNDE-209ENST00000560208 SYT5O00445 386 aa21.09■□□□□ 0.97
CRNDE-209ENST00000560208 CPN1P15169 458 aa21.09■□□□□ 0.97
CRNDE-209ENST00000560208 GABRA3P34903 492 aa21.09■□□□□ 0.97
CRNDE-209ENST00000560208 RFX3P48380 749 aa21.09■□□□□ 0.97
CRNDE-209ENST00000560208 MRPS22P82650 360 aaKnown RBP21.09■□□□□ 0.97
CRNDE-209ENST00000560208 RCAN2Q14206 197 aa21.09■□□□□ 0.97
CRNDE-209ENST00000560208 OR5M10Q6IEU7 315 aa21.09■□□□□ 0.97
CRNDE-209ENST00000560208 ENPP6Q6UWR7 440 aa21.09■□□□□ 0.97
CRNDE-209ENST00000560208 CLEC4FQ8N1N0 589 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms