RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 ST3GAL3Q11203 375 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 PIN1Q13526 163 aaPredicted RBP13.38□□□□□ -0.27
ZEB1-218ENST00000560196 DECR1Q16698 335 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 MRPL2Q5T653 305 aaKnown RBP13.38□□□□□ -0.27
ZEB1-218ENST00000560196 TMEM154Q6P9G4 183 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 TMEM205Q6UW68 189 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 THAP5Q7Z6K1 395 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 PRSS58Q8IYP2 241 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 C8orf59Q8N0T1 100 aaPredicted RBP13.38□□□□□ -0.27
ZEB1-218ENST00000560196 BCORP1Q8N888 145 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 ZNF321PQ8N8H1 164 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 OR4N2Q8NGD1 307 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 LIN37Q96GY3 246 aaPredicted RBP13.38□□□□□ -0.27
ZEB1-218ENST00000560196 LCORQ96JN0 433 aaPredicted RBP13.38□□□□□ -0.27
ZEB1-218ENST00000560196 SPSB2Q99619 263 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 MCHR1Q99705 422 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 CTRCQ99895 268 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 ZPBPQ9BS86 351 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 DGCR6LQ9BY27 220 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 SEMA4CQ9C0C4 833 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 HOXD1Q9GZZ0 328 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
ZEB1-218ENST00000560196 ZNF556Q9HAH1 456 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 PAPOLBQ9NRJ5 636 aaKnown RBP13.38□□□□□ -0.27
ZEB1-218ENST00000560196 MAN2C1Q9NTJ4 1040 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 RHCGQ9UBD6 479 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 COPS7AQ9UBW8 275 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 MRTO4Q9UKD2 239 aaKnown RBP13.38□□□□□ -0.27
ZEB1-218ENST00000560196 OR10H1Q9Y4A9 318 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 PCDHGB5Q9Y5G0 923 aa13.38□□□□□ -0.27
ZEB1-218ENST00000560196 CENPVL1A0A0U1RR11 272 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 TRIM64A6NGJ6 449 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 SAGE2PA6NJ88 616 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 H3BNH8 94 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 PEX12O00623 359 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 BCKDKO14874 412 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 CNOT3O75175 753 aaKnown RBP13.37□□□□□ -0.27
ZEB1-218ENST00000560196 IL33O95760 270 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 FUT4P22083 530 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 TAS2R41P59536 307 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 INSM1Q01101 510 aaPredicted RBP13.37□□□□□ -0.27
ZEB1-218ENST00000560196 SPEM2Q0P670 501 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 NPRL3Q12980 569 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 TRAM2Q15035 370 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 EBPQ15125 230 aaKnown RBP13.37□□□□□ -0.27
ZEB1-218ENST00000560196 KCTD21Q4G0X4 260 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 FGD3Q5JSP0 725 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 ZNF691Q5VV52 312 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 CD300LDQ6UXZ3 194 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 ZNF517Q6ZMY9 492 aaPredicted RBP13.37□□□□□ -0.27
ZEB1-218ENST00000560196 LANCL3Q6ZV70 420 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 GALNT5Q7Z7M9 940 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 RANBP3LQ86VV4 465 aaPredicted RBP13.37□□□□□ -0.27
ZEB1-218ENST00000560196 TSPYL5Q86VY4 417 aaPredicted RBP13.37□□□□□ -0.27
ZEB1-218ENST00000560196 ZNF441Q8N8Z8 693 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 SETD9Q8NE22 299 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 NFAM1Q8NET5 270 aaPredicted RBP13.37□□□□□ -0.27
ZEB1-218ENST00000560196 OR9Q2Q8NGE9 314 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 SLC7A13Q8TCU3 470 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 FBLIM1Q8WUP2 373 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 METTL21AQ8WXB1 218 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 MUS81Q96NY9 551 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 RIBC2Q9H4K1 309 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 RLIMQ9NVW2 624 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 TESQ9UGI8 421 aaKnown RBP13.37□□□□□ -0.27
ZEB1-218ENST00000560196 NDRG4Q9ULP0 352 aaKnown RBP13.37□□□□□ -0.27
ZEB1-218ENST00000560196 MYRFQ9Y2G1 1151 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 ASCC3Q8N3C0 2202 aaKnown RBP13.37□□□□□ -0.27
ZEB1-218ENST00000560196 GPR179Q6PRD1 2367 aa13.37□□□□□ -0.27
ZEB1-218ENST00000560196 RALGAPA1Q6GYQ0 2036 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 NPIPA5A0A0B4J1W7 369 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 C2orf92A0A1B0GVN3 265 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 NPIPA7E9PJI5 369 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 FOXD2O60548 495 aaPredicted RBP13.36□□□□□ -0.27
ZEB1-218ENST00000560196 CYP7B1O75881 506 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 CLIC3O95833 236 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 CD63P08962 238 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 NPIPA8P0DM63 369 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 CDK4P11802 303 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 SLC5A2P31639 672 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 ADH7P40394 386 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 CLK3P49761 638 aaKnown RBP13.36□□□□□ -0.27
ZEB1-218ENST00000560196 TCF15Q12870 199 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 FGFBP1Q14512 234 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 SEC23BQ15437 767 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 ENTPD8Q5MY95 495 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 PDZK1Q5T2W1 519 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 HLA-DQA1Q5Y7H0 255 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 LCN10Q6JVE6 187 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 PODNL1Q6PEZ8 512 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 TTC33Q6PID6 262 aaPredicted RBP13.36□□□□□ -0.27
ZEB1-218ENST00000560196 FAM198BQ6UWH4 519 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 PLEKHM3Q6ZWE6 761 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 SLC29A4Q7RTT9 530 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 PIP4P1Q86T03 277 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 C9orf40Q8IXQ3 194 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 AQP11Q8NBQ7 271 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 SLC38A4Q969I6 547 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 TP53INP1Q96A56 240 aa13.36□□□□□ -0.27
ZEB1-218ENST00000560196 HSPBAP1Q96EW2 488 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms