RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 ANGPT1Q15389 498 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 GPR68Q15743 365 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 CCNJQ5T5M9 372 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 GDF7Q7Z4P5 450 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 RBM12BQ8IXT5 1001 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 SHISA5Q8N114 240 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 NANOGP1Q8N7R0 232 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 CDRT4Q8N9R6 151 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 PROKR2Q8NFJ6 384 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 TOR1AIP2Q8NFQ8 470 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 OR8D4Q8NGM9 314 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 TMEM163Q8TC26 289 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 ORAI3Q9BRQ5 295 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 IER2Q9BTL4 223 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 HHATLQ9HCP6 504 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 SATB2Q9UPW6 733 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 SPAG17Q6Q759 2223 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 KPNA4O00629 521 aaPredicted RBP13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 HRO43593 1189 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 NTN1O95631 604 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 RAB36O95755 333 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 THY1P04216 161 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 IFI6P09912 130 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 FPR3P25089 353 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 NUDT1P36639 197 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 BLKP51451 505 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 C1orf61Q13536 156 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 PRICKLE4Q2TBC4 344 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 DCST2Q5T1A1 773 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 ARMC6Q6NXE6 501 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 ZCCHC12Q6PEW1 402 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 SLC36A4Q6YBV0 504 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF438Q7Z4V0 828 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 PARGQ86W56 976 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF619Q8N2I2 560 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 OR52I1Q8NGK6 324 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 DOK4Q8TEW6 326 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 ZDHHC1Q8WTX9 485 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 SLC38A2Q96QD8 506 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 STACQ99469 402 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 CDADC1Q9BWV3 514 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 PRRG3Q9BZD7 231 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 SEMA6CQ9H3T2 930 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 DUSP22Q9NRW4 184 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 MAT2BQ9NZL9 334 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 TESQ9UGI8 421 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 POMT2Q9UKY4 750 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 DIMT1Q9UNQ2 313 aaKnown RBP13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 CENPVL1A0A0U1RR11 272 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 A0A1W2PPC4 97 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 MYL12BO14950 172 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 KIAA0513O60268 411 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 STX11O75558 287 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 SLC34A2O95436 690 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 DBIP07108 87 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 ST6GAL1P15907 406 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 TYRP1P17643 537 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 ENDOUP21128 410 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 RPS4Y1P22090 263 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 STAT5AP42229 794 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 RANBP1P43487 201 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 PSMD7P51665 324 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 RAB38P57729 211 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 RPL6Q02878 288 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 C1DQ13901 141 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 KLHL22Q53GT1 634 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 MBOAT2Q6ZWT7 520 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 COX18Q8N8Q8 333 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 KLHDC7BQ96G42 594 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 C6orf62Q9GZU0 229 aaPredicted RBP13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 STARD5Q9NSY2 213 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 DAPK2Q9UIK4 370 aa13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 TNRC6BQ9UPQ9 1833 aaKnown RBP13.46□□□□□ -0.25
RABGGTA-212ENST00000559974 CACNA1HO95180 2353 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 IRGMA1A4Y4 181 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 SNTNA6NMZ2 147 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 SGK494L7N484 410 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 PRODHO43272 600 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 HCRTR1O43613 425 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 ZNF217O75362 1048 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 SP9P0CG40 484 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 SOX3P41225 446 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 ZNF136P52737 540 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 PPP5CP53041 499 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 RPS3AP61247 264 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 IFITM3Q01628 133 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 MGAT2Q10469 447 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 MAP4K2Q12851 820 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 TRIM16LQ309B1 348 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 RANBP3LQ86VV4 465 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 NRMQ8IXM6 262 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 TMEM255BQ8WV15 326 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 PIK3R3Q92569 461 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 OSTF1Q92882 214 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 MROQ9BYG7 248 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 POLR2J2Q9GZM3 115 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 FAM60AQ9NP50 221 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 MRPS18AQ9NVS2 196 aaKnown RBP13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 CLCA2Q9UQC9 943 aa13.45□□□□□ -0.26
RABGGTA-212ENST00000559974 CFL2Q9Y281 166 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms