RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 GRIP1Q9Y3R0 1128 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 RPL36Q9Y3U8 105 aaKnown RBP10□□□□□ -0.81
CARMIL3-202ENST00000559694 PATE3B3GLJ2 98 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 FLRT2O43155 660 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 PRKRAO75569 313 aaKnown RBP10□□□□□ -0.81
CARMIL3-202ENST00000559694 AK1P00568 194 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 STSP08842 583 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 CD63P08962 238 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 CPMP14384 443 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 CAPZBP47756 277 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 NXPH1P58417 271 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 HSF2Q03933 536 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 NKAIN1Q4KMZ8 207 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 RETREG3Q86VR2 466 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 NLGN4XQ8N0W4 816 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 OR6Q1Q8NGQ2 317 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 MS4A4EQ96PG1 132 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 ADOQ96SZ5 270 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 SIAEQ9HAT2 523 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 TAS2R7Q9NYW3 318 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 ATG4BQ9Y4P1 393 aa10□□□□□ -0.81
CARMIL3-202ENST00000559694 CRYZL1O95825 349 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 TSPAN12O95859 305 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 TEAD1P28347 426 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 DCTP40126 519 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 STARP49675 285 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 SF3B4Q15427 424 aaKnown RBP eCLIP9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 UGT3A2Q3SY77 523 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 AGAP7PQ5VUJ5 663 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 FAM111BQ6SJ93 734 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 ZNF547Q8IVP9 402 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 ZNF595Q8IYB9 648 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 ABCA7Q8IZY2 2146 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 CADM3Q8N126 398 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 SLC5A8Q8N695 610 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 CHDHQ8NE62 594 aaPredicted RBP9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 OR52R1Q8NGF1 315 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 OR6K6Q8NGW6 343 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 OR2T11Q8NH01 316 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 RHOXF1Q8NHV9 184 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 BCL7BQ9BQE9 202 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 MCCC2Q9HCC0 563 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 RDH8Q9NYR8 311 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 AASSQ9UDR5 926 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 MAN2B2Q9Y2E5 1009 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 ZNF451Q9Y4E5 1061 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 IGLV3-16A0A075B6K0 115 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 LOC105369274A0A096LPK9 316 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 LOC102723532A0A0G2JNH3 316 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 WWP2O00308 870 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 DLGAP1O14490 977 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 LCMT2O60294 686 aaKnown RBP9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 IFNA7P01567 189 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 CELA2BP08218 269 aaPredicted RBP9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 RCVRNP35243 200 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 VASPP50552 380 aaPredicted RBP9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 SNRPD2P62316 118 aaKnown RBP9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 HBA1P69905 142 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 RGNQ15493 299 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 DHRS13Q6UX07 377 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 SH2D5Q6ZV89 423 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 BMP8AQ7Z5Y6 402 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 OR4N4Q8N0Y3 316 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 GALNT6Q8NCL4 622 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 OR5T3Q8NGG3 340 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 ZNF431Q8TF32 576 aaPredicted RBP9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 ZFP3Q96NJ6 502 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 MGLLQ99685 303 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 RNASET2O00584 256 aaKnown RBP9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 CH25HO95992 272 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 GGT1P19440 569 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 KCNJ5P48544 419 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 RAB38P57729 211 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 NPRL3Q12980 569 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 RCAN2Q14206 197 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 RAET1LQ5VY80 246 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 GUSBP11Q6P575 273 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 MSANTD1Q6ZTZ1 278 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 VWCEQ96DN2 955 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 WACQ9BTA9 647 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 DOHHQ9BU89 302 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 KCNN2Q9H2S1 579 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 MTHFD2LQ9H903 347 aaPredicted RBP9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 BTNL2Q9UIR0 455 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 ADAM29Q9UKF5 820 aa9.99□□□□□ -0.81
CARMIL3-202ENST00000559694 IRGMA1A4Y4 181 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 LRIT2A6NDA9 550 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 KHDRBS3O75525 346 aaKnown RBP9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 ACPPP15309 386 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 SLC6A12P48065 614 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 SLC5A12Q1EHB4 618 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 GARNL3Q5VVW2 1013 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 HMBOX1Q6NT76 420 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 PRSS48Q7RTY5 328 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 TRIM46Q7Z4K8 759 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 SLC35F3Q8IY50 421 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 TIGD4Q8IY51 512 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 UFD1Q92890 307 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 SGPP1Q9BX95 441 aa9.98□□□□□ -0.81
CARMIL3-202ENST00000559694 CHIAQ9BZP6 476 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms