RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 POLR3FQ9H1D9 316 aaPredicted RBP3.5□□□□□ -1.85
CASC4-206ENST00000558847 OPN3Q9H1Y3 402 aaPredicted RBP3.5□□□□□ -1.85
CASC4-206ENST00000558847 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.5□□□□□ -1.85
CASC4-206ENST00000558847 ZNF446Q9NWS9 450 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 ZNF581Q9P0T4 197 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 MAB21L2Q9Y586 359 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 MAD1L1Q9Y6D9 718 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 IKBKGQ9Y6K9 419 aa3.5□□□□□ -1.85
CASC4-206ENST00000558847 SHISA9B4DS77 424 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 K7EQM0 130 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 MBD3O95983 291 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 CT45A10P0DMU9 189 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 TBXA2RP21731 343 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 ATP5A1P25705 553 aaKnown RBP3.49□□□□□ -1.85
CASC4-206ENST00000558847 PPT1P50897 306 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 GBX2P52951 348 aaPredicted RBP3.49□□□□□ -1.85
CASC4-206ENST00000558847 RND3P61587 244 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 PUDPQ08623 228 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 RIPPLY1Q0D2K3 151 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 GPM6BQ13491 265 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 LTB4RQ15722 352 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 LEMD1Q68G75 181 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 RGS9BPQ6ZS82 235 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 TIPARPQ7Z3E1 657 aaKnown RBP3.49□□□□□ -1.85
CASC4-206ENST00000558847 KRTAP7-1Q8IUC3 87 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 GRAMD2AQ8IUY3 354 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 BPIFB2Q8N4F0 458 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 CLDN19Q8N6F1 224 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 STEAP2Q8NFT2 490 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 OR2T34Q8NGX1 318 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 ITLN1Q8WWA0 313 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 RAB3CQ96E17 227 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 C7orf34Q96L11 122 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 ZNF607Q96SK3 696 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 HCAR1Q9BXC0 346 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 GFRA4Q9GZZ7 299 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 GNB4Q9HAV0 340 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 COX16Q9P0S2 106 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 DPM3Q9P2X0 92 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 SMC3Q9UQE7 1217 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 GSTK1Q9Y2Q3 226 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 USP6P35125 1406 aa3.49□□□□□ -1.85
CASC4-206ENST00000558847 NPIPA7E9PJI5 369 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 ZSCAN12O43309 604 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 SPAG6O75602 509 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 GJB5O95377 273 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 PIGRP01833 764 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 FAM200BP0CF97 657 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 NPIPA8P0DM63 369 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 GLRA2P23416 452 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 FNTAP49354 379 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 HMGCS2P54868 508 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 RGS1Q08116 209 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 IL18R1Q13478 541 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 SELPLGQ14242 412 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 PDK3Q15120 406 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 MAPK6Q16659 721 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 SNAI3Q3KNW1 292 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 TEX44Q53QW1 395 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 CELF3Q5SZQ8 465 aaKnown RBP3.48□□□□□ -1.85
CASC4-206ENST00000558847 TMEM225Q6GV28 225 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 CASC1Q6TDU7 716 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 KDELC1Q6UW63 502 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 STAC2Q6ZMT1 411 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 ZNF600Q6ZNG1 722 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 LANCL3Q6ZV70 420 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 SERINC5Q86VE9 423 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 ZNF683Q8IZ20 524 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 C15orf54Q8N8G6 183 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 SUMF1Q8NBK3 374 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 MAPK1IP1LQ8NDC0 245 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 OR52M1Q8NGK5 317 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 NANPQ8TBE9 248 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 AENQ8WTP8 325 aaKnown RBP3.48□□□□□ -1.85
CASC4-206ENST00000558847 SLC5A11Q8WWX8 675 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 TMEM80Q96HE8 168 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 PIWIL1Q96J94 861 aaKnown RBP3.48□□□□□ -1.85
CASC4-206ENST00000558847 TTC25Q96NG3 672 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 SOSTQ9BQB4 213 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 CALHM2Q9HA72 323 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 CUTCQ9NTM9 273 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 CLEC5AQ9NY25 188 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 RCOR3Q9P2K3 495 aaPredicted RBP3.48□□□□□ -1.85
CASC4-206ENST00000558847 ANAPC7Q9UJX3 599 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 NPIPA1Q9UND3 350 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 RPH3ALQ9UNE2 315 aa3.48□□□□□ -1.85
CASC4-206ENST00000558847 MRPS33Q9Y291 106 aaKnown RBP3.48□□□□□ -1.85
CASC4-206ENST00000558847 ATAD2BQ9ULI0 1458 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 SNED1Q8TER0 1413 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 OR6C65A6NJZ3 312 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 FAM74A7A6NL05 159 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 EFCAB7A8K855 629 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 G3V3Y1 287 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 MPHOSPH10O00566 681 aaKnown RBP3.47□□□□□ -1.85
CASC4-206ENST00000558847 SLC17A2O00624 439 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 SCGNO76038 276 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 OPN1MWP04001 364 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 H2BFMP0C1H6 154 aa3.47□□□□□ -1.85
CASC4-206ENST00000558847 OPN1MW2P0DN77 364 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms