RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 NSD1Q96L73 2696 aaPredicted RBP14.18□□□□□ -0.14
LINC01220-201ENST00000558575 A0A096LPI6 279 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 TRBV5-3A0A0A0MS03 114 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 C2orf72A6NCS6 295 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 LRRC3CA6NJW4 275 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 C17orf51A8MQB3 221 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 B4DXG7 233 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 FBP2O00757 339 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 ABCB7O75027 752 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 ICOSLGO75144 302 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 TRIM3O75382 744 aaPredicted RBP14.17□□□□□ -0.14
LINC01220-201ENST00000558575 GLSO94925 669 aaPredicted RBP14.17□□□□□ -0.14
LINC01220-201ENST00000558575 UNC5CO95185 931 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 OR12D1P0DN82 309 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 TDGF1P3P51864 188 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 GAS1P54826 345 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 POU6F2P78424 691 aaPredicted RBP14.17□□□□□ -0.14
LINC01220-201ENST00000558575 EFR3AQ14156 821 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 C6orf10Q5SRN2 563 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 HEPHL1Q6MZM0 1159 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 TNFAIP8L2Q6P589 184 aaPredicted RBP14.17□□□□□ -0.14
LINC01220-201ENST00000558575 APOOLQ6UXV4 268 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 OLIG3Q7RTU3 272 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 COX18Q8N8Q8 333 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 OR4C3Q8NH37 302 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 PNPT1Q8TCS8 783 aaKnown RBP14.17□□□□□ -0.14
LINC01220-201ENST00000558575 TSPEARQ8WU66 669 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 RELTQ969Z4 430 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 TPT1P8Q9HAU6 139 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 ARMCX1Q9P291 453 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 ADAM21Q9UKJ8 722 aa14.17□□□□□ -0.14
LINC01220-201ENST00000558575 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.17□□□□□ -0.14
LINC01220-201ENST00000558575 HMGN4O00479 90 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 SHOX2O60902 331 aaPredicted RBP14.16□□□□□ -0.14
LINC01220-201ENST00000558575 KCNH1O95259 989 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 KRT16P08779 473 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 RFPL3SP0C7P2 107 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 IL12BP29460 328 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 ADSLP30566 484 aaPredicted RBP14.16□□□□□ -0.14
LINC01220-201ENST00000558575 KRT20P35900 424 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 CHI3L1P36222 383 aaPredicted RBP14.16□□□□□ -0.14
LINC01220-201ENST00000558575 RFX3P48380 749 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 FUT5Q11128 374 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.16□□□□□ -0.14
LINC01220-201ENST00000558575 HYAL4Q2M3T9 481 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 GRAMD1BQ3KR37 738 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 MTDHQ86UE4 582 aaKnown RBP14.16□□□□□ -0.14
LINC01220-201ENST00000558575 TREML1Q86YW5 311 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 DPP10Q8N608 796 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 TRIML2Q8N7C3 387 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 CHDHQ8NE62 594 aaPredicted RBP14.16□□□□□ -0.14
LINC01220-201ENST00000558575 NR4A3Q92570 626 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 TMCO6Q96DC7 493 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 CCT8L2Q96SF2 557 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 SDF2Q99470 211 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 SLX1AQ9BQ83 275 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 CCDC106Q9BWC9 280 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 TTTY12Q9BZ98 90 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 MYLK2Q9H1R3 596 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 GALNT9Q9HCQ5 603 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 CHST11Q9NPF2 352 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 VAPAQ9P0L0 249 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 NDUFAF1Q9Y375 327 aa14.16□□□□□ -0.14
LINC01220-201ENST00000558575 PRRC2AP48634 2157 aaKnown RBP14.15□□□□□ -0.14
LINC01220-201ENST00000558575 EXPH5Q8NEV8 1989 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 LOC100653049A0A140TA62 436 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 PRAMEF25A6NGN4 478 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 DUXAA6NLW8 204 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 FCMRO60667 390 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 KRT34O76011 436 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 SOX30O94993 753 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 UTS2O95399 124 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 ANP32DO95626 131 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 MAPK11Q15759 364 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 DCST2Q5T1A1 773 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC01220-201ENST00000558575 AP1ARQ63HQ0 302 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 SLC30A6Q6NXT4 461 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 FAM180AQ6UWF9 173 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 C10orf111Q8N326 155 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 TMEM251Q8N6I4 163 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 WDSUB1Q8N9V3 476 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 POGLUT1Q8NBL1 392 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 OR52N2Q8NGI0 321 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 XAGE5Q8WWM1 108 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 CCDC120Q96HB5 630 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 DOHHQ9BU89 302 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 NSRP1Q9H0G5 558 aaKnown RBP14.15□□□□□ -0.14
LINC01220-201ENST00000558575 TSPAN10Q9H1Z9 355 aaPredicted RBP14.15□□□□□ -0.14
LINC01220-201ENST00000558575 IKZF5Q9H5V7 419 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 METTL7AQ9H8H3 244 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 IL1RL2Q9HB29 575 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 OLAHQ9NV23 265 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 LEF1Q9UJU2 399 aaPredicted RBP14.15□□□□□ -0.14
LINC01220-201ENST00000558575 MRTO4Q9UKD2 239 aaKnown RBP14.15□□□□□ -0.14
LINC01220-201ENST00000558575 GMEB1Q9Y692 573 aa14.15□□□□□ -0.14
LINC01220-201ENST00000558575 NPIPA5A0A0B4J1W7 369 aa14.14□□□□□ -0.15
LINC01220-201ENST00000558575 NPIPA7E9PJI5 369 aa14.14□□□□□ -0.15
LINC01220-201ENST00000558575 NPIPB9F8W1W9 429 aa14.14□□□□□ -0.15
LINC01220-201ENST00000558575 C19orf84I3L1E1 186 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms