RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 P2RX2Q9UBL9 471 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 MKLN1Q9UL63 735 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 BOKQ9UMX3 212 aaPredicted RBP15.96■□□□□ 0.15
TPM1-214ENST00000558544 LIPT1Q9Y234 373 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 WIF1Q9Y5W5 379 aa15.96■□□□□ 0.15
TPM1-214ENST00000558544 LRRC3CA6NJW4 275 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 C17orf51A8MQB3 221 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 FAM166BA8MTA8 275 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 SLC28A2O43868 658 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 FCMRO60667 390 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 TNFRSF21O75509 655 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 SNX4O95219 450 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 H6PDO95479 791 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 NPPAP01160 153 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 BCHEP06276 602 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 CHRM4P08173 479 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 NR2F1P10589 423 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 ZNF24P17028 368 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 GPX2P18283 190 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 TBXA2RP21731 343 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 CPA2P48052 419 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 RNF144AP50876 292 aaPredicted RBP15.95■□□□□ 0.14
TPM1-214ENST00000558544 GAS1P54826 345 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 MAPK11Q15759 364 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 RNFT1Q5M7Z0 435 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 GCNT6Q5T4J0 391 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 FAM91A1Q658Y4 838 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 TYW3Q6IPR3 259 aaKnown RBP15.95■□□□□ 0.14
TPM1-214ENST00000558544 NANOGP8Q6NSW7 305 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 APOOLQ6UXV4 268 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 FRRS1Q6ZNA5 592 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 MARCH3Q86UD3 253 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 PACS2Q86VP3 889 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 MAL2Q969L2 176 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 NTNG2Q96CW9 530 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 TMEM41AQ96HV5 264 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 TBL1XR1Q9BZK7 514 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 RTN4RQ9BZR6 473 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 TSPAN10Q9H1Z9 355 aaPredicted RBP15.95■□□□□ 0.14
TPM1-214ENST00000558544 RUBCNLQ9H714 662 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 NANOGQ9H9S0 305 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 UBQLN4Q9NRR5 601 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 ARL8BQ9NVJ2 186 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 WDR45Q9Y484 360 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 HRH3Q9Y5N1 445 aa15.95■□□□□ 0.14
TPM1-214ENST00000558544 SCDO00767 359 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 ADAM10O14672 748 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 KIAA0513O60268 411 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 CRYABP02511 175 aaKnown RBP15.94■□□□□ 0.14
TPM1-214ENST00000558544 NGFRP08138 427 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 BMP2P12643 396 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 HPGDP15428 266 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 CLK3P49761 638 aaKnown RBP15.94■□□□□ 0.14
TPM1-214ENST00000558544 NUDT2P50583 147 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 ALDH6A1Q02252 535 aaKnown RBP15.94■□□□□ 0.14
TPM1-214ENST00000558544 CHRNEQ04844 493 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 RABL3Q5HYI8 236 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 FNDC7Q5VTL7 733 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 ZNF619Q8N2I2 560 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 ZNF614Q8N883 585 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 GATSQ8NAP1 163 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 SLC38A5Q8WUX1 472 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 TMEM19Q96HH6 336 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 TRNT1Q96Q11 434 aaKnown RBP15.94■□□□□ 0.14
TPM1-214ENST00000558544 SLC38A1Q9H2H9 487 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 EFCAB1Q9HAE3 211 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 ZFP64Q9NPA5 681 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 OLAHQ9NV23 265 aa15.94■□□□□ 0.14
TPM1-214ENST00000558544 THUMPD1Q9NXG2 353 aaKnown RBP15.94■□□□□ 0.14
TPM1-214ENST00000558544 CENPVL1A0A0U1RR11 272 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 TMEM247A6NEH6 219 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 ALG1L2C9J202 215 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 NPIPB9F8W1W9 429 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 ACOT7O00154 380 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 TFECO14948 347 aaPredicted RBP15.93■□□□□ 0.14
TPM1-214ENST00000558544 SNPHO15079 494 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 GLSO94925 669 aaPredicted RBP15.93■□□□□ 0.14
TPM1-214ENST00000558544 TFPTP0C1Z6 253 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 RFPL3SP0C7P2 107 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 ATP12AP54707 1039 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 PPIAP62937 165 aaKnown RBP15.93■□□□□ 0.14
TPM1-214ENST00000558544 ART3Q13508 389 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 RPS26P11Q5JNZ5 115 aaPredicted RBP15.93■□□□□ 0.14
TPM1-214ENST00000558544 OR5M10Q6IEU7 315 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 LRRC74BQ6ZQY2 392 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 HMGN2P46Q86SG4 172 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 TMEM251Q8N6I4 163 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 ZNF527Q8NB42 609 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 OR8J3Q8NGG0 315 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 OR1J4Q8NGS1 313 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 FAR1Q8WVX9 515 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 HOXD1Q9GZZ0 328 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 QRSL1Q9H0R6 528 aaKnown RBP15.93■□□□□ 0.14
TPM1-214ENST00000558544 A4GALTQ9NPC4 353 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 POLE3Q9NRF9 147 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 AGPAT4Q9NRZ5 378 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 PPP4R1LQ9P1A2 415 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 TAGLN3Q9UI15 199 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 KCNE5Q9UJ90 142 aa15.93■□□□□ 0.14
TPM1-214ENST00000558544 ZNF407Q9C0G0 2248 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms