RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 C20orf141Q9NUB4 165 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 NTMQ9P121 344 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 NDOR1Q9UHB4 597 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 RPL36Q9Y3U8 105 aaKnown RBP9.82□□□□□ -0.84
TPM1-210ENST00000558264 PCDHGA3Q9Y5H0 932 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 CSNK1G3Q9Y6M4 447 aa9.82□□□□□ -0.84
TPM1-210ENST00000558264 OR5K4A6NMS3 321 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 C10orf142B7Z368 130 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 CCRL2O00421 344 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 GNB5O14775 395 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 STX11O75558 287 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 CBX7O95931 251 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 IGLV3-19P01714 112 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 OCM2P0CE71 109 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 OCMP0CE72 109 aaPredicted RBP9.81□□□□□ -0.84
TPM1-210ENST00000558264 MAOAP21397 527 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 CSTF2P33240 577 aaKnown RBP eCLIP9.81□□□□□ -0.84
TPM1-210ENST00000558264 PGDP52209 483 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 TSPAN31Q12999 210 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 TMEM201Q5SNT2 666 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 SMARCD3Q6STE5 483 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 ZNF619Q8N2I2 560 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 VWA5B2Q8N398 1253 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 ZFP41Q8N8Y5 198 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 KCNS3Q9BQ31 491 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 POLR2J2Q9GZM3 115 aaKnown RBP9.81□□□□□ -0.84
TPM1-210ENST00000558264 ZNF350Q9GZX5 532 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 UBE2ZQ9H832 354 aaPredicted RBP9.81□□□□□ -0.84
TPM1-210ENST00000558264 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 SOHLH2Q9NX45 425 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 DAPK2Q9UIK4 370 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 YARS2Q9Y2Z4 477 aaKnown RBP9.81□□□□□ -0.84
TPM1-210ENST00000558264 LSM2Q9Y333 95 aaKnown RBP9.81□□□□□ -0.84
TPM1-210ENST00000558264 MAU2Q9Y6X3 613 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 ZC3H12DA2A288 527 aaKnown RBP9.81□□□□□ -0.84
TPM1-210ENST00000558264 MYL12BO14950 172 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 MAGEA8P43361 318 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 BLKP51451 505 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 PLAURQ03405 335 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 DNASE1L3Q13609 305 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 NDUFA9Q16795 377 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 RGS21Q2M5E4 152 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 ZNF404Q494X3 552 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 SLC35F1Q5T1Q4 408 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 FCRLBQ6BAA4 426 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 CD300LDQ6UXZ3 194 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 USP43Q70EL4 1123 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 C9orf43Q8TAL5 461 aaPredicted RBP9.81□□□□□ -0.84
TPM1-210ENST00000558264 ACOT11Q8WXI4 607 aaPredicted RBP9.81□□□□□ -0.84
TPM1-210ENST00000558264 RNFT2Q96EX2 444 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 VMP1Q96GC9 406 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 SAMD8Q96LT4 415 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 PTCHD1Q96NR3 888 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 SLC38A3Q99624 504 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 ENKD1Q9H0I2 346 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 TRIM45Q9H8W5 580 aaPredicted RBP9.81□□□□□ -0.84
TPM1-210ENST00000558264 GPR27Q9NS67 375 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 UCKL1Q9NWZ5 548 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 SPAG17Q6Q759 2223 aa9.81□□□□□ -0.84
TPM1-210ENST00000558264 FAM221BA6H8Z2 402 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 METTL15A6NJ78 407 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 PLOD3O60568 738 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 ADAM11O75078 769 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 PIPP12273 146 aaPredicted RBP9.8□□□□□ -0.84
TPM1-210ENST00000558264 GSTM3P21266 225 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 CD38P28907 300 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 IFNA8P32881 189 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 RAB38P57729 211 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 MXD1Q05195 221 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 STX4Q12846 297 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 NDUFAF6Q330K2 333 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 LRIT3Q3SXY7 679 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 FLYWCH1Q4VC44 716 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 PDZK1Q5T2W1 519 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 FAM26EQ8N5C1 309 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 CDRT4Q8N9R6 151 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 CNOT9Q92600 299 aaKnown RBP9.8□□□□□ -0.84
TPM1-210ENST00000558264 NACC2Q96BF6 587 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 CLIP3Q96DZ5 547 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 CDADC1Q9BWV3 514 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 TPK1Q9H3S4 243 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 MED20Q9H944 212 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 TMEM184BQ9Y519 407 aaPredicted RBP9.8□□□□□ -0.84
TPM1-210ENST00000558264 IGHV5-51A0A0C4DH38 117 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 FOXS1O43638 330 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 SULT1C4O75897 302 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 IGKV1D-16P01601 117 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 PROS1P07225 676 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 GLULP15104 373 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 EMDP50402 254 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 POU6F2P78424 691 aaPredicted RBP9.8□□□□□ -0.84
TPM1-210ENST00000558264 RPL6Q02878 288 aaKnown RBP9.8□□□□□ -0.84
TPM1-210ENST00000558264 SMAD4Q13485 552 aaKnown RBP9.8□□□□□ -0.84
TPM1-210ENST00000558264 ZNF267Q14586 743 aaPredicted RBP9.8□□□□□ -0.84
TPM1-210ENST00000558264 OR1Q1Q15612 314 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 OCLNQ16625 522 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 SNAP47Q5SQN1 464 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 PRAMEF17Q5VTA0 474 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 LHFPL3Q86UP9 236 aa9.8□□□□□ -0.84
TPM1-210ENST00000558264 ANKK1Q8NFD2 765 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms